New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3847156 = | 41 (0.680) | 3 (0.050) | 3/256 | NT | 7.4% | coding (246/1329 nt) | PP_3396 | hypothetical protein |
? | NC_002947 | 3847197 = | 36 (0.620) | coding (287/1329 nt) | PP_3396 | hypothetical protein |
GGCAGCGAATGCCGCTTCGATCGCCGTGCCATAGCTGAGGTCGATGCCACGCGCAGCGTCGACGATTGCAGCGTCGGCAGTGAACCAGAACGCTTCGTCAGGGAAGTTGGTGGGGAAGACGATGGGTTGGGTATCGTCGAACACACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3847303‑3847156 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccaACTTCCCTGACGAAGCGTTCTGGTTCACTGCCGACGCTGCAATCGTCGACGCTGCGCGTGGCATCGACCTCAGCTATGGCACGGCGATCGAAGCGGCATTCGCTGCCGAAGAACCTGTCGAGGGTGACCAGGTCAGCTTCGCCCG > NC_002947/3847197‑3847341 GGCAGCGAATGCCGCTTCGATCGCCGTGCCATAGCTGAGGTCGATGCCACGCGCAGCGTCGACGATTGCAGCGTCGGCAGTGAACCAGAACGCTTCGTCAGGGAAGTTGGTGGGGAAGACGATGGGTTGGGTATCGTCGAACACACCA < 2:328387/148‑1 AGCGTCGACGATTGCAGCGTCGGCAGTGAACCAGAACGCTTCGTCAGGGAAGTTGGTGGGGAAGACGATGGGTTGGGTATCGTCGAACACA > 3:92216/1‑91 AGCGTCGACGATTGCAGCGTCGGCAGTGAACCAGAACGCTTCGTCAGGGAAGTTGGTGGGGAAGACGATGGGTTGGGTATCGTCGAACACA < 4:92216/91‑1 GTTGGTGGGGAAGACGATGGGTTGGGTATCGTCGAACACACCAACTTCCCTGACGAAGCGTTCTGGTTCACTGCCGACGCTGCAATCGTCGACGCTGCGCGTGGCATCGACCTCAGCTATGGCACGGCGATCG > 1:336356/1‑133 GTTGGTGGGGAAGACGATGGGTTGGGTATCGTCGAACACACCAACTTCCCTGACGAAGCGTTCTGGTTCACTGCCGACGCTGCAATCGTCGACGCTGCGCGTGGCATCGACCTCAGCTATGGCACGGCGATCG < 2:336356/133‑1 TTGGTGGGGAAGACGATGGGTTGGGTATCGTCGAACACACCAACTTCCCTGACGAAGCGTTCTGGTTCACTGCCGACGCTGCAATCGTCGACGCTGCGCGTGGCATCGACCTCAGCTATGGCACGGCGATCGAAGCGGCATTCGCTGCC > 7:40577/1‑149 ACCAACTTCCCTGACGAAGCGTTCTGGTTCACTGCCGACGCTGCAATCGTCGACGCTGCGCGTGGCATCGACCTCAGCTATGGCACGGCGATCGAAGCGGCATTCGCTGCCGAAGAACCTGTCGAGGGTGACCAGGTCAGCTTCGCCCG > 4:109981/1‑149 GGCAGCGAATGCCGCTTCGATCGCCGTGCCATAGCTGAGGTCGATGCCACGCGCAGCGTCGACGATTGCAGCGTCGGCAGTGAACCAGAACGCTTCGTCAGGGAAGTTGGTGGGGAAGACGATGGGTTGGGTATCGTCGAACACACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3847303‑3847156 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccaACTTCCCTGACGAAGCGTTCTGGTTCACTGCCGACGCTGCAATCGTCGACGCTGCGCGTGGCATCGACCTCAGCTATGGCACGGCGATCGAAGCGGCATTCGCTGCCGAAGAACCTGTCGAGGGTGACCAGGTCAGCTTCGCCCG > NC_002947/3847197‑3847341 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |