New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4109808 | 40 (0.660) | 4 (0.070) | 4/248 | NT | 9.6% | coding (1630/2991 nt) | PP_3616 | membrane protein |
? | NC_002947 | = 4109890 | 38 (0.680) | coding (1712/2991 nt) | PP_3616 | membrane protein |
GGCACCTTGTTCGGCGCCAGCGACAACGTGATCGAAGGGCTGGCCGGTCGCTTCCCGGCCATGGCGGACATCACCGACCTCACCGCCCAGTCGGTCAATGCCGTGGTGCTCAAGCGCCTGCGCGGGCAGACCCGATGGGATGCCAGTCATGGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4109652‑4109808 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcctgcTCGGTGATTCGATAGCGCGCCGCCAGCAATCCCAGGGCTTTCTCGGCATTAGCCTCACGCGCTGCCAACTGCACCTGTCGCCGCAGGCCATGACTGGCATCCCATCGGGTCTGCCCGCGCAGGCGCTTGAGCACCACGGCATT < NC_002947/4109890‑4109748 GGCACCTTGTTCGGCGCCAGCGACAACGTGATCGAAGGGCTGGCCGGTCGCTTCCCGGCCATGGCGGACATCACCGACCTCACCGCCCAGTCGGTCAATGCCGTGGTGCTCAAGCGCCTGCGCGGGCAGACCCGATGGGATGCCAGTCA < 8:66504/149‑1 ATCGAAGGGCTGGCCGGTCGCTTCCCGGCCATGGCGGACATCACCGACCTCACCGCCCAGTCGGTCAATGCCGTGGTGCTCAAGCGCCTGCGCGGGCAGACCCGATGGGATGCCAGTCATGGCCTGCTCGGTGATTCGATAGCGCGCCG > 8:304018/1‑149 GGCCGGTCGCTTCCCGGCCATGGCGGACATCACCGACCTCACCGCCCAGTCGGTCAATGCCGTGGTGCTCAAGCGCCTGCGCGGGCAGACCCGATGGGATGCCAGTCATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAATCC > 7:192737/1‑148 TGCCGTGGTGCTCAAGCGCCTGCGCGGGCAGACCCGATGGGATGCCAGTCATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAATCCCAGGGCTTTCTCGGCATTAGCCTCACGCGCTGCCAACTGCACCTGTCGCCGCAGGCCA < 8:192737/149‑1 TGGTGCTCAAGCGCCTGCGCGGGCAGACCCGATGGGATGCCAGTCATGGCCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAATCCCAGGGCTTTCTCGGCATTAGCCTCACGCGCTGCCAACTGCACCTGTCGCCGCAGGCCATGACT < 7:304018/149‑1 CCTGCTCGGTGATTCGATAGCGCGCCGCCAGCAATCCCAGGGCTTTCTCGGCATTAGCCTCACGCGCTGCCAACTGCACCTGTCGCCGCAGGCCATGACTGGCATCCCATCGGGTCTGCCCGCGCAGGCGCTTGAGCACCACGGCATT > 6:184420/1‑148 GGCACCTTGTTCGGCGCCAGCGACAACGTGATCGAAGGGCTGGCCGGTCGCTTCCCGGCCATGGCGGACATCACCGACCTCACCGCCCAGTCGGTCAATGCCGTGGTGCTCAAGCGCCTGCGCGGGCAGACCCGATGGGATGCCAGTCATGGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4109652‑4109808 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggcctgcTCGGTGATTCGATAGCGCGCCGCCAGCAATCCCAGGGCTTTCTCGGCATTAGCCTCACGCGCTGCCAACTGCACCTGTCGCCGCAGGCCATGACTGGCATCCCATCGGGTCTGCCCGCGCAGGCGCTTGAGCACCACGGCATT < NC_002947/4109890‑4109748 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |