| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4271213 = | 63 (1.050) | 4 (0.070) | 4/250 | NT | 6.9% | coding (1353/1896 nt) | mrdA‑I | transpeptidase |
| ? | NC_002947 | 4271308 = | 48 (0.850) | coding (1448/1896 nt) | mrdA‑I | transpeptidase | |||||
CAGCACGATGTCGGGCATGGGGTTTGGGTCGATCGGCGTATCGCCGCCCACGGTCATGGCCAGGTGCGGGCGGTGCCACACGCCCTTGCTTGCCAGCAGGCTGGTGGCCTGGGCCAACTGCAGGGGGGTGACCTGCATGTAACCCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4271363‑4271213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggccaTGACCGTGGGCGGCGATACGCCGATCGACCCAAACCCCATGCCCGACATCGTGCTGCACGACAAGCATGCCTGGGACCAGGTCAGCCAGGGCATGCAGATGGTCATGCACGACCCGCGCGGCATTGCCCGCGCCGCGGCCGCCGGTG > NC_002947/4271308‑4271454 CAGCACGAGGGCTGGCATGGGGGTTGGGGCGATCCCCGTCTCGCCGCCCACGGTCATGGCCAGGTGCGGGCGGTGCCACACGCCCGTGCGTGCCAGCAGGCTGGTGGCCTGGGCCAACTGCAGGGGGGTGACCTGCATGTAACCCTGGC < 8:240739/149‑1 ATGGCCAGGTGCGGGCGGTGCCACACGCCCTTGCTTGCCAGCAGGCTGGTGGCCTGGGCCAACTGCAGGGGGGTGACCTGCATGTAACCCTGGCCATGACCGTGGGCGGCGATACGCCGATCGACCCAAACCCCATGCCCGACATCGTG > 7:99618/1‑149 CACACGCCCTTGCTTGCCAGCAGGCTGGTGGCCTGGGCCAACTGCAGGGGGGTGACCTGCATGTAACCCTGGCCATGACCGTGGGCGGCGATACGCCGATCGACCCAAACCCCATGCCCGACATCGTGCTGCAC > 7:112286/1‑134 CACACGCCCTTGCTTGCCAGCAGGCTGGTGGCCTGGGCCAACTGCAGGGGGGTGACCTGCATGTAACCCTGGCCATGACCGTGGGCGGCGATACGCCGATCGACCCAAACCCCATGCCCGACATCGTGCTGCAC < 8:112286/134‑1 CTTGCTTGCCAGCAGGCTGGTGGCCTGGGCCAACTGCAGGGGGGTGACCTGCATGTAACCCTGGCCATGACCGTGGGCGGCGATACGCCGATCGACCCAAACCCCATGCCCGACATCGTGCTGCACGACAAGCATGCCTGGGACCAGGT < 8:99618/149‑1 CTGGCCATGACCGTGGGCGGCGATACGCCGATCGACCCAAACCCCATGCCCGACATCGTGCTGCACGACAAGCATGCCTGGGACCAGGTCAGCCAGGGCATGCAGATGGTCATGCACGACCCGCGCGGCATTGCCCGCGCCGCGGCCGC < 2:68950/149‑1 CATGACCGTGGGCGGCGATACGCCGATCGTCCCAAACCCCATGCCCGACATCGTGCTGCACGACAAGCATGCCTGGGACCAGGTCAGCCAGGGCATGCAGATGGTCATGCACGACCCGCGCGGCATTGCCCGCGCCGCGGCCGCCGGTG > 4:284371/1‑149 CATGACCGTGGGCGGCGATACGCCGATCGACCCAAACCCCATGCCCGACATCGTGCTGCACGACAAGCATGCCTGGGACCAGGTCAGCCAGGGCATGCAGATGGTCATGCACGACCCGCGCGGCATTGCCCGCGCCGCGGCCGCCGGTG > 6:49033/1‑149 CATGACCGTGGGCGGCGATACGCCGATCGACCCAAACCCCATGCCCGACATCGTGCTGCACGACAAGCATGCCTGGGACCAGGTCAGCCAGGG > 5:307230/1‑93 CATGACCGTGGGCGGCGATACGCCGATCGACCCAAACCCCATGCCCGACATCGTGCTGCACGACAAGCATGCCTGGGACCAGGTCAGCCAGGG < 6:307230/93‑1 CAGCACGATGTCGGGCATGGGGTTTGGGTCGATCGGCGTATCGCCGCCCACGGTCATGGCCAGGTGCGGGCGGTGCCACACGCCCTTGCTTGCCAGCAGGCTGGTGGCCTGGGCCAACTGCAGGGGGGTGACCTGCATGTAACCCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4271363‑4271213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggccaTGACCGTGGGCGGCGATACGCCGATCGACCCAAACCCCATGCCCGACATCGTGCTGCACGACAAGCATGCCTGGGACCAGGTCAGCCAGGGCATGCAGATGGTCATGCACGACCCGCGCGGCATTGCCCGCGCCGCGGCCGCCGGTG > NC_002947/4271308‑4271454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |