| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4676930 = | 38 (0.630) | 3 (0.050) | 3/252 | NT | 7.5% | coding (1644/2250 nt) | ldcC | lysine decarboxylase |
| ? | NC_002947 | 4676980 = | 38 (0.670) | coding (1594/2250 nt) | ldcC | lysine decarboxylase | |||||
GCCGCGCAGGACTGGCTGCTGCAGCCGGGGGCGCAATGGCATGGGTTTGGTGAAGTGGTGACCGACTATGTGCTGCTCGACCCGCTGAAGGTGACCTTGGTAATGCCGGGCCTGAGCGCAGACGGTGTGCTGGGCGCGCGCGGTATCCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4677082‑4676930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggcaTTACCAAGGTCACCTTCAGCGGGTCGAGCAGCACATAGTCGGTCACCACTTCACCAAACCCATGCCATTGCGCCCCCGGCTGCAGCAGCCAGTCCTGCGCGGCCAGACGGGGGATGCCCTCGGCACTTGGCGGCTGCCAGATGCT > NC_002947/4676980‑4677124 GCCGCGCAGGACTGGCTGCTGCAGCCGGGGGCGCAATGGCATGGGTTTGGTGAAGTGGTGACCGACTATGTGCTGCTCGACCCGCTGAAGGTGACCTTGGTAATGCCGGGCCTGAGCGCAGACGGTGTGCTGGGCGCGCGCGGTATCC < 6:62813/148‑1 CGCGCAGGACTGGCTGCTGCAGCCGGGGGCGCAATGGCATGGGTTTGGTGAAGTGGTGACCGACTATGTGCTGCTCGACCCGCTGAAGGTGACCTTGGTAATGCCGGGCCTGAGCGCAGACGGTGTGCTGGGCGCGCGCGGTATCCCGG > 6:197615/1‑149 TGGTAATGCCGGGCCTGAGCGCAGACGGTGTGCTGGGCGCGCGCGGTATCCCGGCATTACCAAGGTCACCTTCAGCGGGTCGAGCAGCACATAGTCGGTCACCACTTCACCAAACCCATGCCATTGCGCCCCCGGCTGCAGCAGCCAGT > 7:152791/1‑149 GGTAATGCCGGGCCTGAGCGCAGACGGTGTGCTGGGCGCGCGCGGTATCCCGGCATTACCAAGGTCACCTTCAGCGGGTCGAGCAGCACATAGTCGGTCACCACTTCACCAAACCCATGCCATTGCGCCCCCGGCTGCAGCAGCCAGTC > 4:44245/1‑149 GCCGGGCCTGAGCGCAGACGGTGTGCTGGGCGCGCGCGGTATCCCGGCATTACCAAGGTCACCTTCAGCGGGTCGAGCAGCACATAGTCGGTCACCACTTCACCAAACCCATGCCATTGCGCCCCCGGCTGCAGCAGCCAGTCCTGCGC > 1:187258/1‑149 CCGGCATTACCAAGGTCACCTTCAGCGGGTCGAGCAGCACATAGTCGGTCACCACTTCACCAAACCCATGCCATTGCGCCCCCGGCTGCAGCAGCCAGTCCTGCGCGGCCAGACGGGGGATGCCCTCGGCACTTGGCGGCTGCCAGATG > 2:98574/1‑149 CCGGCATTACCAAGGTCACCTTCAGCGGGTCGAGCAGCACATAGTCGGTCACCACTTCACCAAACCCATGCCATTGCGCCCCCGGCTGCAGCAGCCAGTCCTGCGCGGCCAGACGGGGGATGCCCTCGGCACTTGGCGGCTGCCAGATG < 6:378544/149‑1 CCGGCATTACCAAGGTCACCTTCAGCGGGTCGAGCAGCACATAGTCGGTCACCACTTCACCAAACCCATGCCATTGCGCCCCCGGCTGCAGCAGCCAGTCCTGCGCGGCCAGACGGGGGATGCCCTCGGCACTTGGCGGCTGC > 7:110790/1‑143 CCGGCATTACCAAGGTCACCTTCAGCGGGTCGAGCAGCACATAGTCGGTCACCACTTCACCAAACCCATGCCATTGCGCCCCCGGCTGCAGCAGCCAGTCCTGCGCGGCCAGACGGGGGATGCCCTCGGCACTTGGCGGCTGC < 8:110790/143‑1 CGGCATTACCAAGGTCACCTTCAGCGGGTCGAGCAGCACATAGTCGGTCACCACTTCACCAAACCCATGCCATTGCGCCCCCGGCTGCAGCAGCCAGTCCTGCGCGGCCAGACGGGGGATGCCCTCGGCACTTGGCGGCTGCCAGATGC < 8:147818/149‑1 GCATTACCAAGGTCACCTTCAGCGGGTCGAGCAGCACATAGTCGGTCACCACTTCACCAAACCCATGCCATTGCGCCCCCGGCTGCAGCAGCCAGTCCTGCGCGGCCAGACGGGGGATGCCCTCGGCACTTGGCGGCTGCCAGATGCT > 1:154433/1‑148 GCCGCGCAGGACTGGCTGCTGCAGCCGGGGGCGCAATGGCATGGGTTTGGTGAAGTGGTGACCGACTATGTGCTGCTCGACCCGCTGAAGGTGACCTTGGTAATGCCGGGCCTGAGCGCAGACGGTGTGCTGGGCGCGCGCGGTATCCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4677082‑4676930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggcaTTACCAAGGTCACCTTCAGCGGGTCGAGCAGCACATAGTCGGTCACCACTTCACCAAACCCATGCCATTGCGCCCCCGGCTGCAGCAGCCAGTCCTGCGCGGCCAGACGGGGGATGCCCTCGGCACTTGGCGGCTGCCAGATGCT > NC_002947/4676980‑4677124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |