New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4698498	66 (1.100)	6 (0.100)	6/256	NT	8.6%	coding (2190/2655 nt)	kdpD	sensor protein
	?	NC_002947	= 4698541	64 (1.110)					coding (2147/2655 nt)	kdpD	sensor protein

CGTGCGGCGTTTTCCAGCACGTTGACCAGTGCCTGCTCGATCAACGCCGCATGCACGAACAGCAATGGCAGCTCGGTCGGCACGTCCGTGTGCACACGCAGCGGCGCCAGCACCACCCGCAGGCGGTTGAGCGCACTGCCGACGATATCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4698346‑4698498 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccTGGGCCATGGCGGCCTCAAGCTGGCCCGCGACTGGGTGGCCCCGGCGGATATCGTCGGCAGTGCGCTCAACCGCCTGCGGGTGGTGCTGGCGCCGCTGCGTGTGCACACGGACGTGCCGACCGAGCTGCCATTGCTGTTCGTGCAT  <  NC_002947/4698541‑4698396                                                                                                                                                                                                                                                                                                             CGTGCGGCGTTTTCCAGCACGTTGACCAGTGCCTGCTCGATCAACGCCGCATGCACGAACAGCAATGGCAGCTCGGTCGGCACGTCCGTGTGCACACGCAGCGGCGCCAGCACCACCCGCAGGCGGTTGAGCGCACTGCCGACGATATC                                                                                                                                                        <  2:307828/149‑1                        GACCAGTGCCTGCTCGATCAACGCCGCATGCACGAACAGCAATGGCAGCTCGGTCGGCACGTCCGTGTGCACACGCAGCGGCGCCAGCACCACCCGCAGGCGGTTGAGCGCACTGCCGACGATATCCGCCTGGGCCATGGCGGCCTC                                                                                                                                   >  2:328184/1‑147                                                      CACGAACAGCAATGGCAGCTCGGTCGGCACGTCCGTGTGCACACGCAGCGGCGCCAGCACCACCCGCAGGCGGTTGAGCGCACTGCCGACGATATCCGCCTGGGCCATGGCGGCCTCAAGCTGGCCCGCGACTGGGTGGCCCCGGCGG                                                                                                    <  1:328184/148‑1                                                           ACAGCAATGGCAGCTCGGTCGGCACGTCCGTGTGCACACGCAGCGGCGCCAGCACCACCCGCAGGCGGTTGAGCGCACTGCCGACGATATCCGCCTGGGCCATGGCGGCCTCAAGCTGGCCCGCGACTGGGTGGCCCCGGCGGATATC                                                                                               >  1:141014/1‑148                                                           ACAGCAATGGCAGCTCGGTCGGCACGTCCGTGTGCACACGCAGCGGCGCCAGCACCACCCGCAGGCGGTTGAGCGCACTGCCGACGATATCCGCCTGGGCCATGGCGGCCTCAAGCTGGCCCGCGACTGGGTGGCCCCGGCGGATATC                                                                                               <  2:141014/148‑1                                                            CAGCAATGGCAGCTCGGTCGGCACGTCCGTGTGCACACGCAGCGGCGCCAGCACCACCCGCAGGCGGTTGAGCGCACTGCCGACGATATCCGCCTGGGCCATGGCGGCCTCAAGCTGGCCCGCGACTGGGTGGCCCCG                                                                                                        <  5:113353/138‑1                                                            CAGCAATGGCAGCTCGGTCGGCACGTCCGTGTGCACACGCAGCGGCGCCAGCACCACCCGCAGGCGGTTGAGCGCACTGCCGACGATATCCGCCTGGGCCATGGCGGCCTCAAGCTGGCCCGCGACTGGGTGGCCCCG                                                                                                        >  6:113353/1‑138                                                                                                                                                     CCGCCTGGGCCATGGCGGCCTCAAGCTGGCCCGCGACTGGGTGGCCCCGGCGGATATCGTCGGCAGTGCGCTCAACCGCCTGCGGGTGGTGCTGGCGCCGCTGCGTGTGCACACG                                      >  5:125720/1‑115                                                                                                                                                     CCGCCTGGGCCATGGCGGCCTCAAGCTGGCCCGCGACTGGGTGGCCCCGGCGGATATCGTCGGCAGTGCGCTCAACCGCCTGCGGGTGGTGCTGGCGCCGCTGCGTGTGCACACG                                      <  6:125720/115‑1                                                                                                                                                     CCGCCTGGGCCATGGCGGCCTCAAGCTGGCCCGCGACTGGGTGGCCCCGGCGGATATCGTCGGCAGTGCGCTCAACCCCCGGCGGGTGGTGCTGGCGCCGCTGCGTGTGCACACGGACGTGCCGACCGAGCTGCCATTGCTGTTCGTG     >  1:119183/1‑148                                                                                                                                                       GCCTGGGCCATGGCGGCCTCAAGCTGGCCCGCGACTGGGTGGCCCCGGCGGATATCGTCGGCAGTGCGCTCAACCGCCTGCGGGTGGTGCTGGCGCCGCTGCGTGTGCACACGGACGTGCCGACCGAGCTGCCATTGCTGTTCGTGCAT  <  2:112005/149‑1                                                                                                                                                                                                                                                                                                             CGTGCGGCGTTTTCCAGCACGTTGACCAGTGCCTGCTCGATCAACGCCGCATGCACGAACAGCAATGGCAGCTCGGTCGGCACGTCCGTGTGCACACGCAGCGGCGCCAGCACCACCCGCAGGCGGTTGAGCGCACTGCCGACGATATCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4698346‑4698498 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccTGGGCCATGGCGGCCTCAAGCTGGCCCGCGACTGGGTGGCCCCGGCGGATATCGTCGGCAGTGCGCTCAACCGCCTGCGGGTGGTGCTGGCGCCGCTGCGTGTGCACACGGACGTGCCGACCGAGCTGCCATTGCTGTTCGTGCAT  <  NC_002947/4698541‑4698396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.