New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5874726 = | 68 (1.130) | 4 (0.070) | 4/256 | NT | 5.3% | coding (1445/1515 nt) | ilvA‑II | threonine deaminase |
? | NC_002947 | 5874768 = | 77 (1.330) | coding (1403/1515 nt) | ilvA‑II | threonine deaminase |
GGGGCTGCAGGTGCCGGAGGACGAACGTCACCTGGTGCCGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5874770‑5874726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCAC > NC_002947/5874768‑5874915 GGGGCTGCAGGTGCCGGAGGACGAACGTCACCTGGTGCCGGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGG > 2:353949/1‑149 GCTGCAGGTGCCGGAGGACGAACGTCACCTGGTGCCGGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGG < 1:215059/146‑1 GCTGCAGGTGCCGGAGGACGAACGTCACCTGGTGCCGGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGG > 2:215059/1‑146 GGACGAACGTCACCTGGTGCCGGCAGCCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCGCTCGGGGAATTCGAA < 1:353949/149‑1 CCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCAC > 1:297581/1‑149 GGGGCTGCAGGTGCCGGAGGACGAACGTCACCTGGTGCCGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5874770‑5874726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcCCCGCCACCACGCGCCCGTCAGCCGCGCCATGGTTGCGGTAGTGGAACATCGAGATGTTCCAGCGCCCGCCCAGCTTGTTGAGGAAGTTGAACAGTGCCCCTGGCCGCTCGGGGAATTCGAAGCGCAGCACCATTTCGTCGCTGGCAC > NC_002947/5874768‑5874915 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |