| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6107943 = | 52 (0.860) | 7 (0.120) | 6/258 | NT | 14.2% | coding (210/873 nt) | pdxY | pyridoxamine kinase |
| ? | NC_002947 | 6107992 = | 34 (0.580) | coding (161/873 nt) | pdxY | pyridoxamine kinase | |||||
CAACAGCGCCGCGGTATTTCCCATGCAGCGTATCGGGGTCAATGCCTGGCCCCTCAATACCGTGCAGTTCTCCAATCACACACAGTATGGCCAGTGGGCGGGGGAAGTGCTTGCCCCAGCGCAAATTCCTGCGTTGGTGGAAGGCATTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6108093‑6107943‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAGCAGGTGC > NC_002947/6107992‑6108138 CAACAGCGCCGCGGTATTTCCCATGCAGCGTATCGGGGTCAATGCCTGGCCCCTCAATACCGTGCAGTTCTCCAATCACACACAGTATGGCCAGTGGGCGGGGGAAGTGCTTGCCCCAGCGCAAATTCCTGCGTTGGTGGAAGGCATTT < 5:232719/149‑1CAACAGCGCCGCGGTATTTCCCATGCAGCGTATCGGGGTCAATGCCTGGCCCCTCAATACCGTGCAGTTCTCCAATCACACACAGTATGGCCAGTGGGCGGGGGAAGTGCTTGCCCCAGCGCAAATTCCTGCGTTGGTGGAAGGCATTT < 8:160465/149‑1 CACACACAGTATGGCCAGTGGGCGGGGGAAGTGCTTGCCCCAGCGCAAATTCCTGCGTTGGTGGAAGGCATTTCCCCCGCCCACGGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACG > 4:78131/1‑149 GGCGGGGGAAGTGCTTGCCCCAGCGCAAATTCCTGCGTTGGTGGAAGGCATTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGG > 2:217234/1‑149 GGGGGAAGTGCTTGCCCCAGCGCAAATTCCTGCGTTGGTGGAAGGCATTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGC > 5:380626/1‑149 TTGCCCCAGCGCAAATTCCTGCGTTGG‑GGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGT > 8:13135/1‑149 TTGCCCCAGCGCAAATTCCTGCGTTGG‑GGCAAGCACTTCCCCCGCCCACTGGACATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGT > 6:253731/1‑149 CTGCGTTGGTGGAAGGCATTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGG < 1:217234/149‑1 CTGCGTTGGTGGAAGGCATTGCCCCCGCCCACTGGCCATACTGTGTGTGAGTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTG < 6:380626/148‑1 CCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAGCAGGTGC > 2:285235/1‑149 CCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAGCAGGTGC < 4:153157/149‑1 CAACAGCGCCGCGGTATTTCCCATGCAGCGTATCGGGGTCAATGCCTGGCCCCTCAATACCGTGCAGTTCTCCAATCACACACAGTATGGCCAGTGGGCGGGGGAAGTGCTTGCCCCAGCGCAAATTCCTGCGTTGGTGGAAGGCATTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6108093‑6107943‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAGCAGGTGC > NC_002947/6107992‑6108138 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |