| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6107943 = | 52 (0.860) | 7 (0.120) | 6/258 | NT | 14.2% | coding (210/873 nt) | pdxY | pyridoxamine kinase |
| ? | NC_002947 | 6107992 = | 34 (0.580) | coding (161/873 nt) | pdxY | pyridoxamine kinase | |||||
CTTGATCCGCTCGACGCCGGCCAGGATCGCTCGCCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAGCAGGTGC > NC_002947/6107844‑6108138 | cTTGATCCGCTCGACGCCGGCCAGGATCGCTCGCCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTccc < 1:231548/149‑1 (MQ=255) gcgccgcggtatttcccatgcagcgtatcggggtcaatgcctggcccctcaataccgtgcagttctccaatcacacacagtatggccagtgggcgggGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTccccc > 5:380626‑M1/98‑149 (MQ=255) gATCCGCTCGACGCCGGCCAGGATCGCTCGCCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTccccc < 6:274345/148‑1 (MQ=255) gATCCGCTCGACGCCGGCCAGGATCGCTCGCCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCg > 2:218359/1‑149 (MQ=255) aTCCGCTCGACGCCGGCCAGGATCGCTCGCCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGc < 1:299888/149‑1 (MQ=255) ccgcggtatttcccatgcagcgtatcggggtcaatgcctggcccctcaataccgtgcagttctccaatcacacacagtatggccagtgggcgggGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGcc > 2:217234‑M1/95‑149 (MQ=255) ccGGCCAGGATCGCTCGCCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATa < 1:218359/149‑1 (MQ=255) aGGATCGCTCGCCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACtgtgt < 7:331903/149‑1 (MQ=255) ggATCGCTCGCCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACtgtgtg > 3:232603/1‑149 (MQ=255) ggATCGCTCGCCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACtgtgtg < 3:104647/149‑1 (MQ=255) cgtatcggggtcaatgcctggcccctcaataccgtgcagttctccaatcacacacagtatggcccgtgggcgggGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACtgtgtgtg > 4:78131‑M1/75‑149 (MQ=255) tcgcCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACTAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTg > 3:153157/1‑148 (MQ=255) gcCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGga < 7:213513/148‑1 (MQ=255) gcCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGGGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGga < 7:60755/148‑1 (MQ=255) ttCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTg > 5:49332/1‑120 (MQ=255) ttCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTg < 6:49332/120‑1 (MQ=255) ggCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACg < 2:40617/148‑1 (MQ=255) gCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCACCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACgg > 6:151750/1‑148 (MQ=255) cACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGACAACTGCACGGTa < 4:191921/149‑1 (MQ=255) cTGCCCAGGTAGCCTGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATTCTGTGTGTGATTGGAGAACTGCACGGTAtt < 5:151750/149‑1 (MQ=255) cAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAggg < 4:232603/149‑1 (MQ=255) gCCGGAAAGCACCGAATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAgg > 6:2099/1‑149 (MQ=255) gAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCAtt < 5:124325/149‑1 (MQ=255) aaGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGa < 3:129073/149‑1 (MQ=255) aCCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGAcccc > 1:161880/1‑149 (MQ=255) cacacacagtatggccagtgggcgggggaagtgcttgccccagcgcaaattcctgcgttggtggaaggcatttccCCCGCCCACGGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACg > 4:78131‑M2/76‑149 (MQ=255) cAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTgg > 3:258721/1‑103 (MQ=255) cAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTgg < 4:258721/103‑1 (MQ=255) gggCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCAt < 6:303777/148‑1 (MQ=255) cAGCTCGCCGATGATGCAAATGCCTTCCACCAACGCACGAATTTGCGCTGGGGCAAGCACTTCCACCGCCCACTGGCCATACTGTCTGTGATTCCAGAAATTAACCGAATAGACGGGCCAGGCATTGACCAACATACCCTGAATgaga > 4:83708/1‑148 (MQ=255) gCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAATCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATAcc < 5:2099/148‑1 (MQ=255) gCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACcg > 1:187906/1‑149 (MQ=255) cGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACcgcg > 8:160596/1‑149 (MQ=255) cGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACcgcg < 6:353261/149‑1 (MQ=255) ggcgggggaagtgcttgccccagcgcaaattcctgcgttggtggaaggcatttccCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCgcgg > 2:217234‑M2/56‑149 (MQ=255) gggggaagtgcttgccccagcgcaaattcctgcgttggtggaaggcatttccCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGgcgc > 5:380626‑M2/53‑149 (MQ=255) AAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTg < 8:160465‑M1/149‑1 (MQ=255) AAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTg < 5:232719‑M1/149‑1 (MQ=255) ccTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCgg < 8:290590/148‑1 (MQ=255) ttgccccagcgcaaattcctgcgttggggcaagcacttccCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGt > 8:13135‑M2/41‑149 (MQ=255) ttgccccagcgcaaattcctgcgttggggcaagcacttccCCCGCCCACTGGACATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGt > 6:253731‑M2/41‑149 (MQ=255) aaCGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGaa < 1:153947/149‑1 (MQ=255) aCGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGaa > 5:49017/1‑148 (MQ=255) cGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGGGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAaca < 3:100852/149‑1 (MQ=255) gAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGtt < 3:75986/127‑1 (MQ=255) gAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGtt > 4:75986/1‑127 (MQ=255) gAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACg > 3:325316/1‑149 (MQ=255) ctgcgttggtggaaggcatttccCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTgg < 1:217234‑M2/126‑1 (MQ=255) ctgcgttggtggaaggcattgccCCCGCCCACTGGCCATACTGTGTGTGAGTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTg < 6:380626‑M2/125‑1 (MQ=255) aaGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGa > 4:19325/1‑149 (MQ=255) gCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAg > 4:240698/1‑148 (MQ=255) cACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAGCa < 5:253731/149‑1 (MQ=255) aCTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGc > 4:269253/1‑113 (MQ=255) aCTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGc < 3:269253/113‑1 (MQ=255) aCTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAGCa < 7:13135/148‑1 (MQ=255) aCTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAGCAg < 2:116777/149‑1 (MQ=255) cTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGGATGGGAAATATCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAGCAgg > 8:138808/1‑149 (MQ=255) ccCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAGCAGGTGc < 4:153157‑M2/147‑1 (MQ=255) ccCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAGCAGGTGc > 2:285235‑M2/3‑149 (MQ=255) | CTTGATCCGCTCGACGCCGGCCAGGATCGCTCGCCCTTGTTCGGCACTGCCCAGGTAGCCGGAAAGCACCGCATCGCAGTGGCCCAGCTCGCCGATGTTGGAAATGCCTTCCACCAACGCAGGAATTTGCGCTGGGGCAAGCACTTCCCCCGCCCACTGGCCATACTGTGTGTGATTGGAGAACTGCACGGTATTGAGGGGCCAGGCATTGACCCCGATACGCTGCATGGGAAATACCGCGGCGCTGTTGCCGGCGTGGCCGAACACCACGTGGGACTGAATGGCGAGCAGGTGC > NC_002947/6107844‑6108138 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |