New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 378581	59 (0.980)	3 (0.050)	3/258	NT	5.1%	coding (834/1293 nt)	gbcA	glycine‑betaine dioxygenase subunit
	?	NC_002947	= 378616	54 (0.930)					coding (799/1293 nt)	gbcA	glycine‑betaine dioxygenase subunit

CACGATCATGTGGTCGCCCATGCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATT‑CCTGGCTGGCGCGCGGGTCGTTGGTGTCGTCCCACT  >  NC_002947/378434‑378723                                                                                                                                                    |                                                                                                                                                 cacGATCATGTGGTCGCCCATGCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGagca                                                                                                                                                 <  1:201945/149‑1 (MQ=255) cacGATCATGTGGTCGCCCATGCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGagca                                                                                                                                                 >  1:320984/1‑149 (MQ=255)   cGATCATGTGGTCGCCCATGCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGagcagc                                                                                                                                               >  6:93450/1‑149 (MQ=255)   cGATCATGTGGTCGCCCATGCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGagcagc                                                                                                                                               <  3:25252/149‑1 (MQ=255)    gATCATGTGGTCGCCCATGCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCg                                                                                                                                              >  4:339172/1‑149 (MQ=255)    gATCATGTGGTCGCCCATGCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCg                                                                                                                                              >  3:284147/1‑149 (MQ=255)           tgGTCGCCCATGCAGTGGTTCCACGAGTGCCGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATgcg                                                                                                                                       >  1:352652/1‑149 (MQ=255)             gTCGCCCATGCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCa                                                                                                                                     >  6:259080/1‑149 (MQ=255)                 cccATGCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGCTGCGACCGATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGGCATCGAGACGGTGCCCTTGAGCAGCGGCATGCGCACGAt                                                                                                                                 >  1:212820/1‑149 (MQ=255)                 cccATGCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGAt                                                                                                                                 <  3:270057/149‑1 (MQ=255)                     tGCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCgg                                                                                                                             <  4:284147/149‑1 (MQ=255)                      gCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGt                                                                                                                            >  5:195373/1‑149 (MQ=255)                       cAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGt                                                                                                                            <  2:76658/148‑1 (MQ=255)                                cACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGAGGCATGCGCACGAAGCGGTTAC‑GCAGGcc                                                                                                                 >  7:178938/1‑149 (MQ=255)                                  cGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGt                                                                                                               <  6:195373/149‑1 (MQ=255)                                   gAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTg                                                                                                              >  1:267467/1‑149 (MQ=255)                                         ggcaggggcaggATGCGCATCGCGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCGTGCCGTCCATGGTCATCGACACGGGGCCCTTGAGCcacggcctgcgtaaccgcatcgtgcgcatgccgctgcgcaa                                                                                                         <  5:224951‑M1/149‑42 (MQ=255)                                         ggCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCTCACGATGCGGTTAC‑GCAGGCCGTGGCTCtt                                                                                                        <  5:58368/149‑1 (MQ=255)                                         ggCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCtt                                                                                                        <  3:339172/149‑1 (MQ=255)                                           cAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTtgt                                                                                                      <  7:137036/149‑1 (MQ=255)                                                    gATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACg                                                                                             >  3:222881/1‑149 (MQ=255)                                                     aTGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACgg                                                                                            <  5:259080/149‑1 (MQ=255)                                                           aTCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGAtctt                                                                                      >  5:160866/1‑149 (MQ=255)                                                           aTCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGAtctt                                                                                      >  5:184781/1‑149 (MQ=255)                                                              gAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACg                                                                                             >  4:39094/1‑139 (MQ=255)                                                              gAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACg                                                                                             <  3:39094/139‑1 (MQ=255)                                                              gAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTtctc                                                                                   <  2:320984/149‑1 (MQ=255)                                                              gAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTtctc                                                                                   >  1:257374/1‑149 (MQ=255)                                                               aGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCg                                                                                  >  7:245848/1‑149 (MQ=255)                                                                 ccAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGc                                                                                >  8:213123/1‑149 (MQ=255)                                                                    aGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTc                                                                             <  2:267467/149‑1 (MQ=255)                                                                     ggTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTcc                                                                            <  4:222881/149‑1 (MQ=255)                                                                       tCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTcc                                                                            >  5:81961/1‑147 (MQ=255)                                                                           ggTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAgg                                                                        <  5:118195/147‑1 (MQ=255)                                                                                ttGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGg                                                                                                             >  8:142436‑M2/1‑104 (MQ=255)                                                                                ttGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGg                                                                                                             <  7:142436‑M2/105‑2 (MQ=255)                                                                                ttGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAgcggc                                                                 >  1:286811/1‑149 (MQ=255)                                                                                ttGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAgcggc                                                                 <  2:352652/149‑1 (MQ=255)                                                                                  gATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGGACGGGATCTTCTCGGCTTCCCAGGCAgcggcg                                                                >  2:15882/1‑148 (MQ=255)                                                                                   aTGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAgcggcg                                                                >  1:259406/1‑147 (MQ=255)                                                                                    tGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAg                                                             >  2:325300/1‑149 (MQ=255)                                                                                        aCCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGTCAGCGGCGGAggcgg                                                         <  6:160866/149‑1 (MQ=255)                                                                                             tCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCcacggcctgcgtaaccgcatcgtgcgcatgccgctgctcaagg                                                                                                       >  2:278462‑M1/1‑56 (MQ=255)                                                                                             tCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCcacggcctgcgtaaccgcatcgtgcgcatgccgctgctcaagg                                                                                                       <  1:278462‑M1/99‑44 (MQ=255)                                                                                               aGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACAt                                                   <  6:184781/148‑1 (MQ=255)                                                                                                 cTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGt                                                <  8:245848/149‑1 (MQ=255)                                                                                                  ttCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTc                                               >  3:170849/1‑149 (MQ=255)                                                                                                     tGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCtt                                            >  5:218766/1‑149 (MQ=255)                                                                                                      ggCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCtt                                            >  3:355838/1‑148 (MQ=255)                                                                                                       gCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCtt                                            <  5:93450/147‑1 (MQ=255)                                                                                                       gCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTg                                           >  8:45494/1‑148 (MQ=255)                                                                                                       gCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCACGCAGCGGCGGAGGCGGCCACATGGTCCtt                                            <  6:218766/147‑1 (MQ=255)                                                                                                        cAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGaa                                         >  1:99979/1‑149 (MQ=255)                                                                                                         aGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAAt                                        >  6:337523/1‑149 (MQ=255)                                                                                                          ggCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAAtt                                       >  7:185378/1‑149 (MQ=255)                                                                                                                   gCCGTCGATTGTCATCGACACGGTGCCCGTGTGCAGCTGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATT‑Cctggctg                              <  8:178938/148‑1 (MQ=255)                                                                                                                    ccGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATT‑CCtggctggc                            <  1:15882/149‑1 (MQ=255)                                                                                                                     cGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATT‑CCTGGCTGgcg                           <  7:213123/149‑1 (MQ=255)                                                                                                                      gTCCATGGTCATCGATACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCTGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGCCCACATGGTCCGTGATTA‑CCTGGCTGgcgc                          >  6:205322/1‑149 (MQ=255)                                                                                                                      gTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTcc                                              >  4:65262/1‑130 (MQ=255)                                                                                                                      gTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTcc                                              <  3:65262/130‑1 (MQ=255)                                                                                                                          aTGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATT‑CCTGGCTGGCGCGCgg                      <  4:170849/149‑1 (MQ=255)                                                                                                                           tGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATT‑CCTGGCTGGCGCGCggg                     >  1:151317/1‑149 (MQ=255)                                                                                                                              tCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATT‑CCTGGCTGGCGCGCGGGTCg                  >  2:228863/1‑149 (MQ=255)                                                                                                                                 tCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATT‑CCTGGCTGGCGCGCGGGTCGTTg               <  4:355838/149‑1 (MQ=255)                                                                                                                                        ggTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATT‑CCTGGCTGGCGCGCGGGTCGTTGGTgtcgt        <  2:259406/149‑1 (MQ=255)                                                                                                                                        ggTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATT‑CCTGGCTGGCGCGCGGGTCGTTGGTgtcgt        <  4:267078/149‑1 (MQ=255)                                                                                                                                            cccTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATTCCCTGGCTGGCGCGCGGGTCGTTGGTGTCGTcc      <  1:228863/148‑1 (MQ=255)                                                                                                                                             ccTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGgctcaagggcaccgtgtcgatgaccatggacggcaagcaggcctgccagaagctga                                                      >  2:278462‑M2/1‑43 (MQ=255)                                                                                                                                             ccTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGgctcaagggcaccgtgtcgatgaccatggacggcaagcaggcctgccagaagctga                                                      <  1:278462‑M2/99‑57 (MQ=255)                                                                                                                                              cTTGAGCAGCGGCATGCGCACGATGCGGTTACGGCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATT‑CCTGGCTGGCGCGCGGGTCGTTGGTGTCGTCCCAc   >  1:50513/1‑149 (MQ=255)                                                                                                                                              cTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGCGGCGGCCACATGGTCCTTGAATT‑CCTGGCTGGCGCGCGGGTCGTTGGTGTCGTCCCACt  >  7:316158/1‑149 (MQ=255)                                                                                                                                               ttGCGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGgctcaagggccccgtgtcgatgaccatggacggcacgcaggcctgccagaagctgatgggtcgcatcaagaacccagaccttggcgcgatgcgcatcctgcccctgcc  <  5:224951‑M2/149‑109 (MQ=255)                                                                                                                                                    ccacggcctgcgtaaccgcatcgtgcgcatgccgctgctcaagggcaccgtgtcgatgaccatggacggcaagcaggcctgccagaagctgatgggtcgcatcaa                                          <  7:142436‑M1/105‑105 (MQ=255)                                                                                                                                                    ccacggcctgcgtaaccgcatcgtgcgcatgccgctgctcaagggcaccgtgtcgatgaccatggacggcaagcaggcctgccagaagctgatgggtcgcatcaa                                          >  8:142436‑M1/1‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                 CACGATCATGTGGTCGCCCATGCAGTGGTTCCACGAGTGCGGCAGGTGCAGGATGCGCATCGAGCCAAGGTCTGGGTTCTTGATGCGACCCATCAGCTTCTGGCAGGCCTGCTTGCCGTCCATGGTCATCGACACGGTGCCCTTGAGCAGCGGCATGCGCACGATGCGGTTAC‑GCAGGCCGTGGCTCTTGTGCAGGTACGGGATCTTCTCGGCTTCCCAGGCAGCGGCGGAGGCGGCCACATGGTCCTTGAATT‑CCTGGCTGGCGCGCGGGTCGTTGGTGTCGTCCCACT  >  NC_002947/378434‑378723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.