New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1444115	58 (0.960)	4 (0.070)	3/250	NT	6.9%	coding (71/948 nt)	PP_1262	LysR family transcriptional regulator
	?	NC_002947	= 1444148	53 (0.940)					coding (38/948 nt)	PP_1262	LysR family transcriptional regulator

AGAATCTGTTCGCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACC  >  NC_002947/1443968‑1444258                                                                                                                                                    |                                                                                                                                                 aGAATCTGTTCGCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGGTGAGCAGCCTTGTTTGCAGATGGGCGTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTgcgc                                                                                                                                                 <  2:267288/149‑1 (MQ=255)   aaTCTGTTCGCAACGCATCAGGTAGCGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGcgccg                                                                                                                                               >  6:339299/1‑149 (MQ=255)         ttCGCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCgg                                                                                                                                         >  3:256813/1‑149 (MQ=255)            gCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCgg                                                                                                                                         <  6:40463/146‑1 (MQ=255)            gCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCgg                                                                                                                                         >  5:40463/1‑146 (MQ=255)            gCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCa                                                                                                                                       <  1:204732/148‑1 (MQ=255)            gCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCa                                                                                                                                       <  7:1918/148‑1 (MQ=255)            gCAACGCATCAGGTAACGCTTGCCGGCTTCGCTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑g                                                                                                                                     >  7:222122/1‑149 (MQ=255)                 gCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAg                                                                                                                                >  6:167304/1‑149 (MQ=255)                  cATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGc                                                                                                                               <  8:7637/149‑1 (MQ=255)                   aTCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCt                                                                                                                              >  4:215918/1‑149 (MQ=255)                   aTCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCt                                                                                                                              >  8:212803/1‑149 (MQ=255)                      aGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGcc                                                                                                                           >  6:194012/1‑149 (MQ=255)                        gTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGcc                                                                                                                           >  4:99145/1‑147 (MQ=255)                        gTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGcc                                                                                                                           >  7:179297/1‑147 (MQ=255)                          aaCGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGt                                                                                                                       >  6:295442/1‑149 (MQ=255)                            cGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTg                                                                                                                     <  5:279593/149‑1 (MQ=255)                                 gCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGc                                                                                                                  <  8:179297/147‑1 (MQ=255)                                      cTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTAcgca                                                                                                            <  1:258913‑M2/148‑5 (MQ=255)                                          ggTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGtagcccaactcggcagcttcactgccgctgcggcgcaactg                                                                                                         <  6:226747‑M1/148‑42 (MQ=255)                                             cAGCGCAATGGGGCGGGTGGTACGGTTGCCCAGCCATGTTTGCAGATTGGCTTCCAGGTTGGAGACCGCCCGCGACACGGTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCATGTGAAGCTGCCGAGTTGGGCTACGCAACTGaaa                                                                                                     <  1:233412/149‑1 (MQ=255)                                              aGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGtagcccaactcggcagcttcactgccgctgcggcgcaactggata                                                                                                     <  3:136281‑M1/148‑46 (MQ=255)                                                cgcAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCAc                                                                                                 >  2:24818/1‑149 (MQ=255)                                                  cAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACg                                                                                                >  4:210109/1‑148 (MQ=255)                                                  cAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACg                                                                                                >  4:256546/1‑148 (MQ=255)                                                   aaTGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCa                                                                                              >  4:49925/1‑149 (MQ=255)                                                              tggtACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAgg                                                                                   <  3:258316/149‑1 (MQ=255)                                                                gtACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGgt                                                                                 <  3:215918/149‑1 (MQ=255)                                                                 tACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGtagcccaactcggcagcttcactgccgctgcggcgcaactggata                                                                                                     <  3:300557‑M1/129‑46 (MQ=255)                                                                 tACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGtagcccaactcggcagcttcactgccgctgcggcgcaactggata                                                                                                     >  4:300557‑M1/1‑84 (MQ=255)                                                                 tACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGgtg                                                                                >  3:212970/1‑149 (MQ=255)                                                                      ttGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCAt                                                                           >  2:70960/1‑149 (MQ=255)                                                                         agcagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCTAGTTGGGCTACGCAACTGAAATCACGCATGTTTTGCAGGGTGTCCATgg                                                                         <  7:212803/148‑1 (MQ=255)                                                                           cagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAgg                                                                                   >  5:62486/1‑136 (MQ=255)                                                                           cagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAgg                                                                                   <  6:62486/136‑1 (MQ=255)                                                                           cagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGt                                                                       <  2:258913/148‑1 (MQ=255)                                                                             gcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCAc                                                                    >  8:335283/1‑149 (MQ=255)                                                                              ccTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGgt                                                                                 >  2:73309/1‑135 (MQ=255)                                                                              ccTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGgt                                                                                 <  1:73309/135‑1 (MQ=255)                                                                                         gATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTaga                                                        <  7:335283/149‑1 (MQ=255)                                                                                          aTGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTagag                                                       <  5:339299/149‑1 (MQ=255)                                                                                           tGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTagag                                                       <  8:222122/148‑1 (MQ=255)                                                                                              gCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGAc                                                    >  5:120594/1‑148 (MQ=255)                                                                                              gCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACAGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGAc                                                    >  4:247840/1‑148 (MQ=255)                                                                                                ttCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACaa                                                  >  2:125886/1‑148 (MQ=255)                                                                                                  ccAGGTTGTAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTTGGCTACGCAACTGAAATCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACaaaa                                                <  5:65447/148‑1 (MQ=255)                                                                                                   cAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGtttt                                                                                        >  1:21466/1‑107 (MQ=255)                                                                                                   cAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGtttt                                                                                        <  2:21466/107‑1 (MQ=255)                                                                                                   cAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCGATGGGTCACTCTCGAGGTAGAGGACAAAAtt                                              >  6:5576/1‑149 (MQ=255)                                                                                                   cAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGACGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAAtt                                              >  2:129879/1‑149 (MQ=255)                                                                                                    aGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATtg                                             >  3:154780/1‑149 (MQ=255)                                                                                                    aGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATtg                                             >  7:269905/1‑149 (MQ=255)                                                                                                       ttGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCGTGGGTCACACTCGAGGTAGAGGACAAAATTgtgt                                          >  5:101414/1‑149 (MQ=255)                                                                                                       ttGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTgtgt                                          >  6:12096/1‑149 (MQ=255)                                                                                                             aCCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGaa                                    <  5:167304/149‑1 (MQ=255)                                                                                                                     cgACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTg                            <  3:49925/149‑1 (MQ=255)                                                                                                                         acGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGaaa                        <  1:175805/149‑1 (MQ=255)                                                                                                                            ttCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAaga                     <  1:24818/149‑1 (MQ=255)                                                                                                                              cgcgGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAagag                    <  3:99145/148‑1 (MQ=255)                                                                                                                                      tCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTg           >  2:104090/1‑149 (MQ=255)                                                                                                                                        gTATCCAGTTGCGCCGCAGCTGCA‑GTTAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGc          <  3:256546/148‑1 (MQ=255)                                                                                                                                        gTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTg                                                                                                                     <  4:37032/41‑1 (MQ=255)                                                                                                                                        gTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTg                                                                                                                     >  3:37032/1‑41 (MQ=255)                                                                                                                                         tATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgct         <  3:136281‑M2/148‑104 (MQ=255)                                                                                                                                         tATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgta                            >  4:300557‑M2/1‑45 (MQ=255)                                                                                                                                         tATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgta                            <  3:300557‑M2/129‑85 (MQ=255)                                                                                                                                          aTCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCtt       >  7:199020/1‑149 (MQ=255)                                                                                                                                             cAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgacc     <  6:226747‑M2/148‑108 (MQ=255)                                                                                                                                             cAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCg     <  3:247840/148‑1 (MQ=255)                                                                                                                                                 tGCGtagcccaactcggcagcttcactgccgctgcggcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgaccgaag  <  1:258913‑M1/148‑145 (MQ=255)                                                                                                                                                    |                                                                                                                                                 AGAATCTGTTCGCAACGCATCAGGTAACGCTTGCCGGCTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCATGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACC  >  NC_002947/1443968‑1444258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.