New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1444115	58 (0.960)	4 (0.070)	3/250	NT	6.9%	coding (71/948 nt)	PP_1262	LysR family transcriptional regulator
	?	NC_002947	= 1444148	53 (0.940)					coding (38/948 nt)	PP_1262	LysR family transcriptional regulator

CTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTGGT  >  NC_002947/1444005‑1444283                                                                                                                                                 |                                                                                                                                         cTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTAcgca                                                                                                                                      <  1:258913‑M2/148‑5 (MQ=255)        cAGCGCAATGGGGCGGGTGGTACGGTTGCCCAGCCATGTTTGCAGATTGGCTTCCAGGTTGGAGACCGCCCGCGACACGGTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCATGTGAAGCTGCCGAGTTGGGCTACGCAACTGaaa                                                                                                                               <  1:233412/149‑1 (MQ=255)           cgcAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCAc                                                                                                                           >  2:24818/1‑149 (MQ=255)             cAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACg                                                                                                                          >  4:210109/1‑148 (MQ=255)             cAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACg                                                                                                                          >  4:256546/1‑148 (MQ=255)              aaTGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCa                                                                                                                        >  4:49925/1‑149 (MQ=255)                         tggtACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAgg                                                                                                            <  3:258316/149‑1 (MQ=255)                           gtACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGgt                                                                                                          <  3:215918/149‑1 (MQ=255)                            tACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGgtg                                                                                                         >  3:212970/1‑149 (MQ=255)                                 ttGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCAt                                                                                                    >  2:70960/1‑149 (MQ=255)                                    agcagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCTAGTTGGGCTACGCAACTGAAATCACGCA‑TGTTTTGCAGGGTGTCCATgg                                                                                                  <  7:212803/148‑1 (MQ=255)                                      cagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAgg                                                                                                            <  6:62486/136‑1 (MQ=255)                                      cagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAgg                                                                                                            >  5:62486/1‑136 (MQ=255)                                      cagcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGt                                                                                                <  2:258913/148‑1 (MQ=255)                                        gcCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCAc                                                                                             >  8:335283/1‑149 (MQ=255)                                         ccTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGgt                                                                                                          >  2:73309/1‑135 (MQ=255)                                         ccTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGgt                                                                                                          <  1:73309/135‑1 (MQ=255)                                                    gATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTaga                                                                                 <  7:335283/149‑1 (MQ=255)                                                     aTGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTagag                                                                                <  5:339299/149‑1 (MQ=255)                                                      tGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTagag                                                                                <  8:222122/148‑1 (MQ=255)                                                         gCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGAc                                                                             >  5:120594/1‑148 (MQ=255)                                                         gCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACAGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGAc                                                                             >  4:247840/1‑148 (MQ=255)                                                           ttCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACaa                                                                           >  2:125886/1‑148 (MQ=255)                                                             ccAGGTTGTAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTTGGCTACGCAACTGAAATCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACaaaa                                                                         <  5:65447/148‑1 (MQ=255)                                                              cAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGtttt                                                                                                                 >  1:21466/1‑107 (MQ=255)                                                              cAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGtttt                                                                                                                 <  2:21466/107‑1 (MQ=255)                                                              cAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCGATGGGTCACTCTCGAGGTAGAGGACAAAAtt                                                                       >  6:5576/1‑149 (MQ=255)                                                              cAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGACGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAAtt                                                                       >  2:129879/1‑149 (MQ=255)                                                               aGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATtg                                                                      >  3:154780/1‑149 (MQ=255)                                                               aGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATtg                                                                      >  7:269905/1‑149 (MQ=255)                                                                  ttGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCGTGGGTCACACTCGAGGTAGAGGACAAAATTgtgt                                                                   >  5:101414/1‑149 (MQ=255)                                                                  ttGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTgtgt                                                                   >  6:12096/1‑149 (MQ=255)                                                                        aCCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGaa                                                             <  5:167304/149‑1 (MQ=255)                                                                                cgACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTg                                                     <  3:49925/149‑1 (MQ=255)                                                                                    acGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGaaa                                                 <  1:175805/149‑1 (MQ=255)                                                                                       ttCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAaga                                              <  1:24818/149‑1 (MQ=255)                                                                                         cgcgGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAagag                                             <  3:99145/148‑1 (MQ=255)                                                                                                 tCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTg                                    >  2:104090/1‑149 (MQ=255)                                                                                                   gTATCCAGTTGCGCCGCAGCTGCA‑GTTAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGc                                   <  3:256546/148‑1 (MQ=255)                                                                                                    tATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgct                                   <  3:136281‑M2/148‑104 (MQ=255)                                                                                                    tATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgta                                                      >  4:300557‑M2/1‑45 (MQ=255)                                                                                                    tATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgta                                                      <  3:300557‑M2/129‑85 (MQ=255)                                                                                                     aTCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCtt                                >  7:199020/1‑149 (MQ=255)                                                                                                        cAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTAcgcaactggatacgaccaccgcgaacgtgtcgcgggcggtctccaacctggaagcccatctgcaaacaaggctgctcaaccgtaccacccgccgcattgcgctgacc                               <  6:226747‑M2/148‑108 (MQ=255)                                                                                                        cAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCg                              <  3:247840/148‑1 (MQ=255)                                                                                                                ccgcAGCGGCA‑GTGAAGCTGCCGAGTTCGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGACGTAGAGGACAAAATTCTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCAATCGACCAAAgga                     >  4:342909/1‑148 (MQ=255)                                                                                                                 cgcAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCg                    <  3:210109/149‑1 (MQ=255)                                                                                                                                aGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGttt      <  4:256813/149‑1 (MQ=255)                                                                                                                                  cTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTg    <  5:71711/149‑1 (MQ=255)                                                                                                                                  cTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTg    <  4:212970/149‑1 (MQ=255)                                                                                                                                   tGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTgg   >  8:913/1‑149 (MQ=255)                                                                                                                                   tGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGAGGATTATCGCTGTTTTgg   >  2:52831/1‑149 (MQ=255)                                                                                                                                    gCCGAGTTGGGCTACGCAACTGAAAGCACGCATTGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTgt   >  1:45124/1‑148 (MQ=255)                                                                                                                                    gCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTgg   >  8:168899/1‑148 (MQ=255)                                                                                                                                     ccGTGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTTGAGGTAGATGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTg    <  5:5576/146‑1 (MQ=255)                                                                                                                                     ccGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTGGAGGTAGAGGACAAATTTGTGTCAGGAAGTAACTTGGAAAAGAGAAATAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTg    <  3:342909/146‑1 (MQ=255)                                                                                                                                     ccGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTGGt  >  6:165313/1‑148 (MQ=255)                                                                                                                                     ccGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTGGt  <  5:165313/148‑1 (MQ=255)                                                                                                                                     ccGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATCGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGATAAAGTTGCCTTCGACGAAAGGCGGATTATCGCTGTTTTCGt  >  3:236241/1‑148 (MQ=255)                                                                                                                                                 |                                                                                                                                         CTTCGGTCAGCGCAATGCGGCGGGTGGTACGGTTGAGCAGCCTTGTTTGCAGATGGGCTTCCAGGTTGGAGACCGCCCGCGACACGTTCGCGGTGGTCGTATCCAGTTGCGCCGCAGCGGCA‑GTGAAGCTGCCGAGTTGGGCTACGCAACTGAAAGCACGCA‑TGTTTTGCAGGGTGTCCATGGGTCACTCTCGAGGTAGAGGACAAAATTGTGTCACGAAGTAACTTGGAAAAGAGAAAAAGTTGCCTTCGACCAAAGGCGGATTATCGCTGTTTTGGT  >  NC_002947/1444005‑1444283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.