New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1812100 =	55 (0.910)	4 (0.070)	4/258	NT	6.8%	coding (318/897 nt)	PP_1615	LysR family transcriptional regulator
	?	NC_002947	1812134 =	57 (0.980)					coding (284/897 nt)	PP_1615	LysR family transcriptional regulator

CACCAGGCGAGAGTCGGCCAGGCGGCCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGT  >  NC_002947/1811953‑1812246                                                                                                                                                    |                                                                                                                                                    caccaGGCGAGAGTCGGCCAGGCGGCCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAgc                                                                                                                                                    >  1:344474/1‑149 (MQ=255)   ccaGGCGAGAGTCGGCCAGGCGGCCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAgcgc                                                                                                                                                  <  3:247583/149‑1 (MQ=255)     aGGCGAGAGTCGGCCAGGCGGCCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGGTCAGCTCCACATCCACGCGGAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTc                                                                                                                                                >  5:377052/1‑149 (MQ=255)     aGGCGAGAGTCGGCCAGGCGGCCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTc                                                                                                                                                >  7:12640/1‑149 (MQ=255)      ggCGAGAGTCGGCCAGGCGGCCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCg                                                                                                                                               >  3:122707/1‑149 (MQ=255)      ggCGAGAGTCGGCCAGGCGGCCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCg                                                                                                                                               <  2:344474/149‑1 (MQ=255)       gCGAGAGTCGGCCAGGCGGCCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGc                                                                                                                                              >  3:223862/1‑149 (MQ=255)                 gCCAGGCGGCCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCCGCGGCACGATGAAGCGCTCGCCGTAGGCCAc                                                                                                                                    >  6:287274/1‑149 (MQ=255)                  ccAGGCGGCCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACt                                                                                                                                   >  1:25790/1‑149 (MQ=255)                  ccAGGCGGCCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACt                                                                                                                                   <  2:56202/149‑1 (MQ=255)                     ggcggcCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGca                                                                                                                                >  5:126075/1‑149 (MQ=255)                        ggcCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCacac                                                                                                                             <  4:231704/149‑1 (MQ=255)                               aCGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATgc                                                                                                                      <  2:25790/149‑1 (MQ=255)                                 ggATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATgcgc                                                                                                                    <  4:267839/149‑1 (MQ=255)                                 ggATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATgcg                                                                                                                     >  3:248544/1‑148 (MQ=255)                                   aTGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGca                                                                                                                   >  7:137026/1‑148 (MQ=255)                                       ccAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAg                                                                                                              >  6:162873/1‑149 (MQ=255)                                         aGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGcc                                                                                                            >  1:140671/1‑149 (MQ=255)                                           gTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCt                                                                                                          <  6:153921/149‑1 (MQ=255)                                            tCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCtt                                                                                                         <  5:344970/149‑1 (MQ=255)                                              cATGCCTTCATGCAGGAGGTCGAGGGGGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTAGAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTg                                                                                                        <  5:287152/148‑1 (MQ=255)                                              cATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTgg                                                                                                       <  6:66672/149‑1 (MQ=255)                                              cATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTg                                                                                                        <  2:140671/148‑1 (MQ=255)                                              cATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTg                                                                                                        <  7:64810/148‑1 (MQ=255)                                               aTGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTggg                                                                                                      >  5:84211/1‑149 (MQ=255)                                                ccgggcagaccttcctgcagcattgccaacgcttgcaggatggccgtgaggaagcgctgcgcgccatgggcgacctggccagcgaacccaagggcttgttGCGCTCGCCGTAGGCCACTGCACACGTCATGCGcaacaagcagatagg                                                                                                      <  3:66997‑M1/48‑8 (MQ=255)                                                ccgggcagaccttcctgcagcattgccaacgcttgcaggatggccgtgaggaagcgctgcgcgccatgggcgacctggccagcgaacccaagggcttgttGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAg                                                                                                              >  4:66997‑M1/101‑140 (MQ=255)                                                   cTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCg                                                                                                  >  7:101586/1‑149 (MQ=255)                                                      cATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCt                                                                                                <  2:298131/148‑1 (MQ=255)                                                          cagcagGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGcc                                                                                            <  4:122707/148‑1 (MQ=255)                                                          cagcagGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGc                                                                                             >  1:29471/1‑147 (MQ=255)                                                           agcagGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAg                                                                                          >  2:242764/1‑149 (MQ=255)                                                            gcagGTCGAGGGTGTGGTTGCTCAGATCCACATACACGCGCAACTGCGCGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGCCCAgg                                                                                         >  5:101337/1‑149 (MQ=255)                                                                gTCGAGTGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGc                                                                                     <  5:279518/149‑1 (MQ=255)                                                                   gAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCa                                                                                  >  7:250102/1‑149 (MQ=255)                                                                   gAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCa                                                                                  >  4:34701/1‑149 (MQ=255)                                                                   gAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCa                                                                                  >  7:177550/1‑149 (MQ=255)                                                                      ggTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGTGTTCGCTGGCCAGGTCGCCCATgg                                                                               <  8:137026/149‑1 (MQ=255)                                                                               gCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAgc                                                                       <  5:162873/148‑1 (MQ=255)                                                                                     cTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCt                                                                >  7:318638/1‑149 (MQ=255)                                                                                       ccACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCCTGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCa                                                              <  4:223862/149‑1 (MQ=255)                                                                                          caTCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACgg                                                           <  1:242764/149‑1 (MQ=255)                                                                                              cACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCa                                                        <  8:101586/148‑1 (MQ=255)                                                                                                  cgcAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTg                                                   <  8:318638/149‑1 (MQ=255)                                                                                                    cAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGc                                                  >  8:271731/1‑148 (MQ=255)                                                                                                             cgccatgggcgacctggccagcgaacccaagggcttgttGCGCTCGCCGTAGGCCACTGCACACGTCAt                                                                                                                        <  5:380187‑M1/30‑1 (MQ=255)                                                                                                             cgccatgggcgacctggccagcgaacccaagggcttgttGCGCTCGCCGTAGGCCACTGCACACGTCAt                                                                                                                        >  6:380187‑M1/40‑69 (MQ=255)                                                                                                              tACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGc                                        >  3:152354/1‑148 (MQ=255)                                                                                                                cAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTGCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCaa                                      <  6:377052/148‑1 (MQ=255)                                                                                                                 aGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAAtg                                    >  5:42244/1‑149 (MQ=255)                                                                                                                     ccATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAAtgc‑tg                                >  3:151138/1‑148 (MQ=255)                                                                                                                              gcgTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGC‑AGCATTGCCAACGCTTGCAGGATggcc                      <  3:34701/149‑3 (MQ=255)                                                                                                                                  cACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGcc                  >  3:328138/1‑149 (MQ=255)                                                                                                                                   aCCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCt                     >  6:288515/1‑145 (MQ=255)                                                                                                                                   aCCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCt                     <  5:288515/145‑1 (MQ=255)                                                                                                                                    ccAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCg                >  4:189622/1‑149 (MQ=255)                                                                                                                                     cAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCgg               >  6:345122/1‑149 (MQ=255)                                                                                                                                     cAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCgg               <  6:84211/149‑1 (MQ=255)                                                                                                                                     cAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCgg               >  4:161937/1‑149 (MQ=255)                                                                                                                                              gATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCa      <  2:29471/149‑1 (MQ=255)                                                                                                                                              gATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCa      <  1:340231/149‑1 (MQ=255)                                                                                                                                                tGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAgg    <  3:161937/149‑1 (MQ=255)                                                                                                                                                  aaGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAggg   <  4:328138/148‑1 (MQ=255)                                                                                                                                                   aGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGt  >  1:39496/1‑148 (MQ=255)                                                                                                                                                   aGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGt  >  6:37813/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CACCAGGCGAGAGTCGGCCAGGCGGCCAAGACGGATGGCCAGGTCCATGCCTTCATGCAGCAGGTCGAGGGTGTGGTTGCTCAGCTCCACATCCACGCGCAACTGCGGGTACAGCGCCATGAATCGCGTCACCAGCGGCACGATGAAGCGCTCGCCGTAGGCCACTGCACACGTCATGCGCAACAAGCCCTTGGGTTCGCTGGCCAGGTCGCCCATGGCGCGCAGCGCTTCCTCACGGCCATCCTGCAAGCGTTGGCAATGC‑TGCAGGAAGGTCTGCCCGGCTTCGCTCAGGGT  >  NC_002947/1811953‑1812246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.