New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2439782	56 (0.930)	3 (0.050)	3/256	NT	5.2%	coding (523/1176 nt)	pcaF‑II	beta‑ketoadipyl‑CoA thiolase subunit beta
	?	NC_002947	= 2439818	55 (0.950)					coding (559/1176 nt)	pcaF‑II	beta‑ketoadipyl‑CoA thiolase subunit beta

GGCCACGTCAGCATGATGCATGGCGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCT  >  NC_002947/2439635‑2439927                                                                                                                                                    |                                                                                                                                                  ggCCACGTCAGCATGATGCATGGCGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCg                                                                                                                                                  >  3:320825/1‑149 (MQ=255) ggCCACGTCAGCATGATGCATGGCGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCg                                                                                                                                                  <  8:118259/149‑1 (MQ=255) ggCCACGTCAGCATGATGCATGGCGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGC                                                                                                                                                   <  3:85359‑M1/148‑1 (MQ=255)   ccACGTCAGCATGATGCATGGCGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGtt                                                                                                                                                >  6:271486/1‑149 (MQ=255)    cACGTCAGCATGATGCATGGCGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTc                                                                                                                                               <  3:283951/149‑1 (MQ=255)       gTCAGCATGATGCATGGCGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCa                                                                                                                                            >  5:233135/1‑149 (MQ=255)          aGCATGATGCATGGCGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCa                                                                                                                                         <  2:300543/149‑1 (MQ=255)             atgatgCATGGCGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCt                                                                                                                                      >  7:53965/1‑149 (MQ=255)               gatgCATGGCGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTgg                                                                                                                                    >  3:126118/1‑149 (MQ=255)                     tGGCGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCcac                                                                                                                               >  4:136582/1‑148 (MQ=255)                        cGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCcaca                                                                                                                              >  7:178568/1‑146 (MQ=255)                        cGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCcaca                                                                                                                              <  8:178568/146‑1 (MQ=255)                         gTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCGAAGGCTTCCGGGATGCCGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCCTCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGc                                                                                                                          <  2:313450/149‑1 (MQ=255)                         gTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGc                                                                                                                          >  7:273565/1‑149 (MQ=255)                             aCCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACg                                                                                                                      <  4:104971/149‑1 (MQ=255)                               cccAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGt                                                                                                                    >  2:39762/1‑149 (MQ=255)                               cccAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGt                                                                                                                    >  1:142171/1‑149 (MQ=255)                                ccAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTc                                                                                                                   <  8:51754/149‑1 (MQ=255)                                   aCCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGaa                                                                                                                <  8:75958/149‑1 (MQ=255)                                   aCCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGaa                                                                                                                <  2:142171/149‑1 (MQ=255)                                    cccGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAg                                                                                                               <  1:39762/149‑1 (MQ=255)                                        cACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCcttcgaccgtggccttgtgggccagctggtgcgaacgcaa                                                                                                           <  2:69427‑M1/149‑41 (MQ=255)                                           cTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGtt                                                                                                        <  6:233135/149‑1 (MQ=255)                                           cTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGtt                                                                                                        >  4:310169/1‑149 (MQ=255)                                                cTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGTCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAg                                                                                                    <  8:340338/148‑1 (MQ=255)                                                   gCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGAc                                                                                                 <  3:127170/148‑1 (MQ=255)                                                     aTGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGAc                                                                                                 >  5:232388/1‑146 (MQ=255)                                                      tGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGATCGGCAAGATGCACGGCATCACCAGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACAAGCTGGCCCACAAGGCCACGGTCTAAGGCAAGTTCAAGGACgag                                                                                              >  7:213433/1‑148 (MQ=255)                                                        ccgccAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGatc                                                                                           <  3:16843/149‑1 (MQ=255)                                                               ggCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGa                                                                                    <  7:220912/149‑1 (MQ=255)                                                                  ttCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCggaag                                                                                 >  6:351705/1‑145 (MQ=255)                                                                  ttCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATg                                                                                  >  7:214356/1‑148 (MQ=255)                                                                     cGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAgg                                                                              >  2:144392/1‑149 (MQ=255)                                                                     cGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAg                                                                               <  5:296405/148‑1 (MQ=255)                                                                      gggATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCcttcgaccgtggccttgtgggccagctggtgcgaacg                                                                                                              >  2:164881‑M1/1‑79 (MQ=255)                                                                      gggATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCcttcgaccgtggccttgtgggccagctggtgcgaacg                                                                                                              <  1:164881‑M1/116‑38 (MQ=255)                                                                       ggATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGACACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGc                                                                            >  4:10314/1‑149 (MQ=255)                                                                            atgGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTacga                                                                       >  1:268401/1‑149 (MQ=255)                                                                             tgGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGCGCTacgac                                                                      >  1:191867/1‑149 (MQ=255)                                                                                 ccTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACgag                                                                   >  6:191440/1‑148 (MQ=255)                                                                                      cTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGc                                                             <  6:107217/149‑1 (MQ=255)                                                                                         cAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGTCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATTCAGGGCTACGACGAGAACGGCTTc                                                          <  6:357275/149‑1 (MQ=255)                                                                                             aaTGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGa                                                      <  4:126118/149‑1 (MQ=255)                                                                                               tGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAg                                                    <  3:136582/149‑1 (MQ=255)                                                                                               tGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAg                                                    <  3:34928/149‑1 (MQ=255)                                                                                               tGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAg                                                    <  8:273565/149‑1 (MQ=255)                                                                                               tGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAg                                                    <  6:33442/149‑1 (MQ=255)                                                                                                 cTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGgt                                                  >  4:4053/1‑149 (MQ=255)                                                                                                 cTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGgt                                                  <  5:282916/149‑1 (MQ=255)                                                                                                  tCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTGCGACGAGCACGGCTTCCTGAAGgtg                                                 >  4:285171/1‑149 (MQ=255)                                                                                                  tCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGACGgtg                                                 >  7:304725/1‑149 (MQ=255)                                                                                                       aaGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGa                                            >  2:218380/1‑149 (MQ=255)                                                                                                        aGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGAt                                           <  4:320825/149‑1 (MQ=255)                                                                                                          aTGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGAttt                                         <  8:214356/149‑1 (MQ=255)                                                                                                            gCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGCACGGCTTCCTGAAGGTGTTCGATTTcg                                       >  6:373537/1‑149 (MQ=255)                                                                                                                ggCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAg                                                    >  6:237178/1‑132 (MQ=255)                                                                                                                ggCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAg                                                    <  5:237178/132‑1 (MQ=255)                                                                                                                ggCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTcgacg                                    >  3:15173/1‑148 (MQ=255)                                                                                                                 gCATCACCCGTGAGCAGCAGGACCTTGTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCGACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGaa                                  <  8:213433/149‑1 (MQ=255)                                                                                                                    tCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAAcc                               <  5:191440/149‑1 (MQ=255)                                                                                                                        ccGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTc                           >  6:46000/1‑149 (MQ=255)                                                                                                                          gTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGc                         <  8:53965/149‑1 (MQ=255)                                                                                                                                 gcagGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGaaa                  <  6:232388/149‑1 (MQ=255)                                                                                                                                               gCTTGCGTTCGCACCAGCTGGCCCACAAGGGCACGGTCGAAGGCAAGTTGAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACAACCCTCGAAGGc    >  1:30173/1‑149 (MQ=255)                                                                                                                                                cTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGcc   >  6:193078/1‑149 (MQ=255)                                                                                                                                                 ttGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGgcaagccgaacaggtcctgctgctcacgggtgatgccgtgcatcttgccgagcatttctgcagtcaggcccatcatcccggaagccttggcggcatgcaaggacaggtg  <  2:69427‑M2/149‑110 (MQ=255)                                                                                                                                                   gCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTacgac                                                                      <  2:120116/79‑1 (MQ=255)                                                                                                                                                   gCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTacgac                                                                      >  1:120116/1‑79 (MQ=255)                                                                                                                                                    cGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGgcaagccgaacaggtcctgctgctcacgggtgatgccgtgcatcttgccgagcatttctgcagtcaggcccatcatccc                                <  1:164881‑M2/116‑80 (MQ=255)                                                                                                                                                    cGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGgcaagccgaacaggtcctgctgctcacgggtgatgccgtgcatcttgccgagcatttctgcagtcaggcccatcatccc                                >  2:164881‑M2/1‑37 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GGCCACGTCAGCATGATGCATGGCGTAGACCCCAACCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCT  >  NC_002947/2439635‑2439927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.