New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2439782	56 (0.930)	3 (0.050)	3/256	NT	5.2%	coding (523/1176 nt)	pcaF‑II	beta‑ketoadipyl‑CoA thiolase subunit beta
	?	NC_002947	= 2439818	55 (0.950)					coding (559/1176 nt)	pcaF‑II	beta‑ketoadipyl‑CoA thiolase subunit beta

CCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCATCGCTCAAGCCTGCGTTCAACCCGAAA  >  NC_002947/2439670‑2439958                                                                                                                                                     |                                                                                                                                             cccGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAg                                                                                                                                              <  1:39762/149‑1 (MQ=255)        cTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGtt                                                                                                                                       >  4:310169/1‑149 (MQ=255)        cTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGtt                                                                                                                                       <  6:233135/149‑1 (MQ=255)             cTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGTCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAg                                                                                                                                   <  8:340338/148‑1 (MQ=255)                gCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGAc                                                                                                                                <  3:127170/148‑1 (MQ=255)                  aTGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGAc                                                                                                                                >  5:232388/1‑146 (MQ=255)                   tGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGATCGGCAAGATGCACGGCATCACCAGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACAAGCTGGCCCACAAGGCCACGGTCTAAGGCAAGTTCAAGGACgag                                                                                                                             >  7:213433/1‑148 (MQ=255)                     ccgccAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGatc                                                                                                                          <  3:16843/149‑1 (MQ=255)                            ggCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGa                                                                                                                   <  7:220912/149‑1 (MQ=255)                               ttCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCggaag                                                                                                                >  6:351705/1‑145 (MQ=255)                               ttCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATg                                                                                                                 >  7:214356/1‑148 (MQ=255)                                  cGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAgg                                                                                                             >  2:144392/1‑149 (MQ=255)                                  cGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAg                                                                                                              <  5:296405/148‑1 (MQ=255)                                    ggATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGACACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGc                                                                                                           >  4:10314/1‑149 (MQ=255)                                         atgGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTacga                                                                                                      >  1:268401/1‑149 (MQ=255)                                          tgGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGCGCTacgac                                                                                                     >  1:191867/1‑149 (MQ=255)                                              ccTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACgag                                                                                                  >  6:191440/1‑148 (MQ=255)                                                   cTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGc                                                                                            <  6:107217/149‑1 (MQ=255)                                                      cAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGTCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATTCAGGGCTACGACGAGAACGGCTTc                                                                                         <  6:357275/149‑1 (MQ=255)                                                          aaTGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGa                                                                                     <  4:126118/149‑1 (MQ=255)                                                            tGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAg                                                                                   <  6:33442/149‑1 (MQ=255)                                                            tGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAg                                                                                   <  3:34928/149‑1 (MQ=255)                                                            tGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAg                                                                                   <  8:273565/149‑1 (MQ=255)                                                            tGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAg                                                                                   <  3:136582/149‑1 (MQ=255)                                                              cTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGgt                                                                                 <  5:282916/149‑1 (MQ=255)                                                              cTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGgt                                                                                 >  4:4053/1‑149 (MQ=255)                                                               tCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTGCGACGAGCACGGCTTCCTGAAGgtg                                                                                >  4:285171/1‑149 (MQ=255)                                                               tCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGACGgtg                                                                                >  7:304725/1‑149 (MQ=255)                                                                    aaGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGa                                                                           >  2:218380/1‑149 (MQ=255)                                                                     aGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGAt                                                                          <  4:320825/149‑1 (MQ=255)                                                                       aTGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGAttt                                                                        <  8:214356/149‑1 (MQ=255)                                                                         gCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGCACGGCTTCCTGAAGGTGTTCGATTTcg                                                                      >  6:373537/1‑149 (MQ=255)                                                                             ggCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAg                                                                                   <  5:237178/132‑1 (MQ=255)                                                                             ggCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAg                                                                                   >  6:237178/1‑132 (MQ=255)                                                                             ggCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTcgacg                                                                   >  3:15173/1‑148 (MQ=255)                                                                              gCATCACCCGTGAGCAGCAGGACCTTGTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCGACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGaa                                                                 <  8:213433/149‑1 (MQ=255)                                                                                 tCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAAcc                                                              <  5:191440/149‑1 (MQ=255)                                                                                     ccGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTc                                                          >  6:46000/1‑149 (MQ=255)                                                                                       gTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGc                                                        <  8:53965/149‑1 (MQ=255)                                                                                              gcagGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGaaa                                                 <  6:232388/149‑1 (MQ=255)                                                                                                            gCTTGCGTTCGCACCAGCTGGCCCACAAGGGCACGGTCGAAGGCAAGTTGAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACAACCCTCGAAGGc                                   >  1:30173/1‑149 (MQ=255)                                                                                                             cTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGcc                                  >  6:193078/1‑149 (MQ=255)                                                                                                              ttGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGgcaagccgaacaggtcctgctgctcacgggtgatgccgtgcatcttgccgagcatttctgcagtcaggcccatcatcccggaagccttggcggcatgcaaggacaggtg                                 <  2:69427‑M2/149‑110 (MQ=255)                                                                                                                gCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTacgac                                                                                                     >  1:120116/1‑79 (MQ=255)                                                                                                                gCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTacgac                                                                                                     <  2:120116/79‑1 (MQ=255)                                                                                                                 cGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGgcaagccgaacaggtcctgctgctcacgggtgatgccgtgcatcttgccgagcatttctgcagtcaggcccatcatccc                                                               >  2:164881‑M2/1‑37 (MQ=255)                                                                                                                 cGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGgcaagccgaacaggtcctgctgctcacgggtgatgccgtgcatcttgccgagcatttctgcagtcaggcccatcatccc                                                               <  1:164881‑M2/116‑80 (MQ=255)                                                                                                                   ttCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCAt                            >  1:64487/1‑149 (MQ=255)                                                                                                                   ttCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGAAGGGATACGACGAGAAAGGCTTCATGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCACGAAGGGCTGGc                              >  7:235275/1‑147 (MQ=255)                                                                                                                     cGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCATc                           <  3:310169/148‑1 (MQ=255)                                                                                                                            gCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCATCGCt                        <  6:135526/144‑1 (MQ=255)                                                                                                                            gCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCATCGCt                        >  5:135526/1‑144 (MQ=255)                                                                                                                              tGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTcgac                                                                    <  8:85985/98‑1 (MQ=255)                                                                                                                              tGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTcgac                                                                    >  7:85985/1‑98 (MQ=255)                                                                                                                                  ccACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCATCGCTCAAGCCTGCGt             >  7:5365/1‑149 (MQ=255)                                                                                                                                  ccACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCATCGCTCAAGCCTGCGt             >  2:363727/1‑149 (MQ=255)                                                                                                                                  ccACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCATCGCTCAAGCCTGCGt             <  2:268401/149‑1 (MQ=255)                                                                                                                                  ccACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCATCGCTCAAGCCTGCGt             <  1:144392/149‑1 (MQ=255)                                                                                                                                     caAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCATCGCTCAAGCCTGCGTTCa          <  5:46000/149‑1 (MQ=255)                                                                                                                                           cACGGTCGAAGGCAAGTTCAAGGACGAGATGATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCATCGCTCAAGCCTGCGTTCAACCCg     >  1:32571/1‑148 (MQ=255)                                                                                                                                             cGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCATCGCTCAAGCCTGCGTTCAACCCGaaa  <  1:218380/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                             CCCGCACCTGTCCTTGCATGCCGCCAAGGCTTCCGGGATGATGGGCCTGACTGCAGAAATGCTCGGCAAGATGCACGGCATCACCCGTGAGCAGCAGGACCTGTTCGGCTTGCGTTCGCACCAGCTGGCCCACAAGGCCACGGTCGAAGGCAAGTTCAAGGACGAGATCATCCCGATGCAGGGCTACGACGAGAACGGCTTCCTGAAGGTGTTCGATTTCGACGAAACCATTCGCCCGGAAACCACCCTCGAAGGCCTGGCATCGCTCAAGCCTGCGTTCAACCCGAAA  >  NC_002947/2439670‑2439958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.