New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2880423 =	38 (0.630)	4 (0.070)	4/254	NT	8.6%	coding (265/1176 nt)	PP_2535	transport protein
	?	NC_002947	2880518 =	49 (0.850)					coding (360/1176 nt)	PP_2535	transport protein

TGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAGCGCGCCGGGGCCGTGGCTGCAATGTTCATGGGTT  >  NC_002947/2880278‑2880570                                                                                                                                                  |                                                                                                                                                    tgctgcGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGCCCCTGCCCACGGTGAAGATCCCGCGCCGTTACCTGTTCATCGGGCTGATGGCCATTTTCACCTAGGGCAACCTGATGTCGGCCCTgg                                                                                                                                                  >  6:46285/1‑149 (MQ=255)      cGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGc                                                                                                                                             <  6:191668/149‑1 (MQ=255)        gggCTGCTGGTCAGTGCCTATGCCATGGGCGTGCTGATCGGCGCGGCGGTGATGACGCTGGCCAGGGTTAAGATCCCGGGCCGTTACCTGTTGAGCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTGGGGCGTGgcgagcga                                                                                                                                           <  6:271077/149‑1 (MQ=255)         ggCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGAc                                                                                                                                          >  7:282001/1‑149 (MQ=255)              ctgGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGc                                                                                                                                     <  4:100529/149‑1 (MQ=255)                 gTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCa                                                                                                                                   <  8:324695/148‑1 (MQ=255)                  tCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAg                                                                                                                                  >  7:344549/1‑148 (MQ=255)                  tCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGc                                                                                                                                 <  5:210239/149‑1 (MQ=255)                        ccTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCctgctg                                                                                                                           <  6:29388/149‑1 (MQ=255)                         cTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGCCCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCtgg                                                                                                                          >  4:239767/1‑149 (MQ=255)                            tGCCCTCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGAAGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCtggtg                                                                                                                        <  8:208378/148‑1 (MQ=255)                              gccaacccagcatttcacccaaccaggtcgccaacggcacgccgccgatggtggccagggtcaaacccatgaacattgcagccacggccccggcgcgcttctcgggcggcaccacaCTGGCCAGCGACTACGCCAGCCTGCTGGTGGcc                                                                                                                     <  5:204274‑M1/33‑1 (MQ=255)                              ccATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCAGGCtggcgta                                                                                                                      <  8:344549/148‑5 (MQ=255)                                    gCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTTGCCAGCAACTACGCCAGCCTGCTGGTGGCCCGCGTg                                                                                                               >  3:245449/1‑149 (MQ=255)                                     cGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTgg                                                                                                              <  8:57776/149‑1 (MQ=255)                                           gATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGtcactt                                                                                                        >  7:183207/1‑149 (MQ=255)                                            aTCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGtcactt                                                                                                        <  5:53495/148‑1 (MQ=255)                                               ggCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGtcacttcac                                                                                                     <  8:282001/148‑1 (MQ=255)                                                gcgcgcCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTc                                                                                                   <  8:326281/149‑1 (MQ=255)                                                gcgcgcCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTCGCCAGCAACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTc                                                                                                   <  4:245449/149‑1 (MQ=255)                                                 cgcgcCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCa                                                                                                  <  5:330869/149‑1 (MQ=255)                                                           atgaCCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGgcgc                                                                                        >  3:352593/1‑149 (MQ=255)                                                                    gCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTg                                                                                <  5:243501/148‑1 (MQ=255)                                                                      cACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTg                                                                                >  1:246474/1‑146 (MQ=255)                                                                      cACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTg                                                                                <  2:246474/146‑1 (MQ=255)                                                                       aCGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCAt                                                                            <  8:293107/149‑1 (MQ=255)                                                                       aCGGTGAAGATCCCGCGCCGGTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCAt                                                                            <  7:150085/149‑1 (MQ=255)                                                                         gccgatggtggccagggtcaaacccatgaacattgcagccacggccccggcgcgcttctcgggcggcaccacaCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCg                                                                          <  4:345139‑M1/76‑1 (MQ=255)                                                                                    ccagggtcaaacccatgaacattgcagccacggccccggcgcgcttctcgggcggcaccacaCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGAtcgtc                                                               >  3:345139‑M1/63‑149 (MQ=255)                                                                                         gtcaaacccatgaacattgcagccacggccccggcgcgcttctcgggcggcaccacaCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGc                                                          >  6:204274‑M1/58‑149 (MQ=255)                                                                                             aCCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAgt                                                      >  6:84952/1‑149 (MQ=255)                                                                                                  ttGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTgtggt                                                 <  3:239767/149‑1 (MQ=255)                                                                                                    gATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTgtggtg                                                <  5:7159/148‑1 (MQ=255)                                                                                                     aacGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTgcc                                              >  1:348161/3‑149 (MQ=255)                                                                                                            tGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGccc                                          >  6:144591/1‑146 (MQ=255)                                                                                                                ggCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAgc                                   >  7:280489/1‑149 (MQ=255)                                                                                                                 gCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAgc                                   <  4:352593/148‑1 (MQ=255)                                                                                                                    aTTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAgcgcgc                               >  8:208539/1‑149 (MQ=255)                                                                                                                        tCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAGCGCGCCggg                           >  6:332436/1‑149 (MQ=255)                                                                                                                                 gCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAGCGCGCCGGGGCCGTGGCt                  <  5:84952/149‑1 (MQ=255)                                                                                                                                        gATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAGCGCGCCGGGGCCGTGGCTGCAATGt           >  2:120249/1‑149 (MQ=255)                                                                                                                                           gTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAGCGCGCCGGGGCCGTGGCTGCAATGTTCa        >  6:335050/1‑149 (MQ=255)                                                                                                                                            tCGGCCCTGGCCAGCGACTACGCCTGCGTGGTGGTGGCGCGCGTGGTCACTTCACTCATGCACGGCGCCTTCTTTGGCATCGGCTCGTTCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAGCGCGGCGGGGCCGTGGCTGCATTGTTCAt       <  2:348161/149‑1 (MQ=255)                                                                                                                                              ggCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATGGTCGCGGCCAGTGTGGTGCCGCCCGAGAAGCGCGCCGGGGCCGTGGCTGCAATGTTCATgg     <  5:46285/149‑1 (MQ=255)                                                                                                                                              ggCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAGCGCGCCGGGGCCGTGGCTGCAATGTTCATgg     <  7:208539/149‑1 (MQ=255)                                                                                                                                              ggCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAGCGCGCCGGGGCCGTGGCTGCAATGTTCATgg     >  2:308310/1‑149 (MQ=255)                                                                                                                                                cccTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAGCGCGCCGGGGCCGTGGCTGCAATGTTCATg      >  6:198200/1‑146 (MQ=255)                                                                                                                                                cccTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACATCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGGGGCCAGTGTGGTGCCGGCCGAGAAGCGCGCCGGGGCCGTGGCTGCAATGTTCATg      <  5:198200/146‑1 (MQ=255)                                                                                                                                                 ccTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAGCGCGCCGGGGCCGTGGCTGCAATGTTCATGGGtt  >  1:242468/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                    TGCTGCGGGGCTGCTGGTCAGTGCCTATGCCATCGGCGTGCTGATCGGCGCGCCGCTGATGACCCTGGCCACGGTGAAGATCCCGCGCCGTTACCTGTTGATCGGGCTGATGGCCATTTTCACCTTGGGCAACCTGATGTCGGCCCTGGCCAGCGACTACGCCAGCCTGCTGGTGGCCCGCGTGGTCACTTCACTCAACCACGGCGCCTTCTTTGGCATCGGCTCGATCGTCGCGGCCAGTGTGGTGCCGCCCGAGAAGCGCGCCGGGGCCGTGGCTGCAATGTTCATGGGTT  >  NC_002947/2880278‑2880570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.