New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4963771 =	58 (0.960)	5 (0.090)	4/252	NT	9.9%	intergenic (‑117/+111)	fleS/fleQ	two‑component system sensor histidine kinase FleS/transcriptional regulator FleQ
	?	NC_002947	4963837 =	36 (0.630)					intergenic (‑183/+45)	fleS/fleQ	two‑component system sensor histidine kinase FleS/transcriptional regulator FleQ

GCTCGGGATACGTGGGCGGCCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGAACACCCAGCCCAAACATCAATCCTCCGCCTGGTCCTCACCGCCCTGGCGGCTCA  >  NC_002947/4963626‑4963919                                                                                                                                                  |                                                                                                                                                     cgcggctgaacgtttgcgtattcgccgtaccaccctggtcgagaaaatgcgcaagtacggcatgagccgccagggcggtgaggaccaggcggaggattgatgtttgggctgggtgttcgccttgggggttgcgtttgggcggggtGTTc                                                                                                                                                   >  1:45928‑M1/146‑149 (MQ=255)   tCGGGATACGTGGGCGGCCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTc                                                                                                                                                   >  6:306701/1‑147 (MQ=255)   tCGGGATACGTGGGCGGCCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTc                                                                                                                                                   <  5:306701/147‑1 (MQ=255)   cggctgaacgtttgcgtattcgcagtaccaccctggtcgagaaaatgcgcaagtacggcatgagccgccagggcggtgaggaccaggcggaggattgatgtttgggctgggtgttcgccttgggggttgcgtttgggcggggtGTTCGc                                                                                                                                                 >  4:272242‑M1/144‑149 (MQ=255)     gggATACGTGGGCGGCCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCg                                                                                                                                               >  2:26789/1‑149 (MQ=255)        aTACGTGGGCGGCCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGt                                                                                                                                              >  7:25308/1‑147 (MQ=255)        aTACGTGGGCGGCCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGa                                                                                                                                            <  1:365029/149‑1 (MQ=255)             tttgcgtattcgccgtaccaccctggtcgagaaaatgcgcaagtacggcatgagccgccagggcggtgaggaccaggcggaggattgatgtttgggctgggtgttcgccgtgggggttgcggttgggcggggtGTGCGCGGTGAGgttt                                                                                                                                       <  6:370773‑M1/16‑1 (MQ=255)             tGGGCGGCCTGGGGCATCGTGCTCTCACGCGTGGCTGACCGTCATAAAACGGTGTCTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGCTTTGGGATTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGtttt                                                                                                                                       >  2:93133/1‑149 (MQ=255)               tgcgtattcgccgtaccaccctggtcgagaaaatgcgcaagtacggcatgagccgccagggcggtgaggaccaggcggaggattgatgtttgggctgggtgttcgccttgggggttgcgtttgggcggggtGTTCGCCGTGAGTTttgt                                                                                                                                     <  5:235397‑M1/18‑1 (MQ=255)                gcggcCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTttgtt                                                                                                                                    >  7:237847/1‑149 (MQ=255)                 cggcCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTttgttg                                                                                                                                   >  8:197785/1‑149 (MQ=255)                 cggaCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGATGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTttgttg                                                                                                                                   >  8:305482/1‑149 (MQ=255)                  ggcCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTtgttgt                                                                                                                                  <  4:45108/149‑1 (MQ=255)                  ggcCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTtgttgt                                                                                                                                  >  3:236535/1‑149 (MQ=255)                   gcCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTtgtg                                                                                                                                 <  7:79813/149‑1 (MQ=255)                        gggCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTttgtt                                                                                                                                    <  3:75103/141‑1 (MQ=255)                        gggCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTttgtt                                                                                                                                    >  4:75103/1‑141 (MQ=255)                        gggCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCcgcg                                                                                                                            <  7:197785/149‑1 (MQ=255)                        gccgtaccaccctggtcgagaaaatgcgcaagtacggcatgagccgccagggcggtgaggaccaggcggaggattgatgtttgggctgggtgttcgccttgggggttgcgtttgggcggggtGTTc                                                                                                                                                   >  3:11559‑M1/123‑126 (MQ=255)                        gccgtaccaccctggtcgagaaaatgcgcaagtacggcatgagccgccagggcggtgaggaccaggcggaggattgatgtttgggctgggtgttcgccttgggggttgcgtttgggcggggtGTTc                                                                                                                                                   <  4:11559‑M1/4‑1 (MQ=255)                          gCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGTGTTTTGTTGTGCCGCGga                                                                                                                          <  1:26789/149‑1 (MQ=255)                           cATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGgag                                                                                                                         <  8:201891/149‑1 (MQ=255)                           cATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGgag                                                                                                                         <  2:282941/149‑1 (MQ=255)                            aTCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCcgcg                                                                                                                            >  3:113232/1‑145 (MQ=255)                            aTCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGgaga                                                                                                                        <  4:340128/149‑1 (MQ=255)                                tGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATc                                                                                                                      >  3:310974/1‑147 (MQ=255)                                       tcGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGcgccgc                                                                                                             >  2:11328/1‑149 (MQ=255)                                                 gACCGTCATAAAACGGTGTGTTGCCAGCGGTGTCGCAAAAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATGGCGTTAAGACCGAGAAGGGATCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACaaaa                                                                                                   <  1:220872/149‑1 (MQ=255)                                                  aCCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCcaaacaaa                                                                                                    <  3:262351/147‑1 (MQ=255)                                                  aCCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCcaaacaaa                                                                                                    <  1:11328/147‑1 (MQ=255)                                                   gcaagtacggcatgagccgccagggcggtgaggaccaggcggaggattgatgtttgggctgggtgttcgccttgggggttgcgtttgggcggggtGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAAc                                                                                                 <  2:115072‑M1/54‑1 (MQ=255)                                                   ccGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAAc                                                                                                 <  1:196844/149‑1 (MQ=255)                                                     gTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCt                                                                                               <  8:25308/149‑1 (MQ=255)                                                       cATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTTTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTc                                                                                              <  4:310974/148‑1 (MQ=255)                                                        aTAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAAc                                                                                                 <  6:378522/144‑1 (MQ=255)                                                        aTAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAAc                                                                                                 >  5:378522/1‑144 (MQ=255)                                                         tAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAg                                                                                           >  4:45288/1‑149 (MQ=255)                                                         tAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCAGTGCCGGAGATGGGTGTTTGTGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAgatatg                                                                                                                                      >  2:366120/1‑101 (MQ=255)                                                         tAAAAAGGTTTGTGTCCAGCGGTGTAGAAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGAACTAGAAGGGTTCGCCGTGAGTTttg                                                                                                                                      <  1:366120/106‑1 (MQ=255)                                                            gcatgagccgccagggcggggaggaccaggcggaggattgatgtttgggctgggtgttcgccttgggggttgcgtttgggcggggtGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCg                                                                                        >  6:235397‑M1/87‑149 (MQ=255)                                                              cGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGaa                                                                                      <  4:113232/149‑1 (MQ=255)                                                              atgagccgccagggcggtgaggaccaggcggaggattgatgtttgggctgggtgttcgccttgggggttgcgtttgggcggggtGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGaa                                                                                      >  1:115072‑M1/85‑149 (MQ=255)                                                                        ccAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGcc                                                                             >  4:43241/1‑148 (MQ=255)                                                                          aGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTttgtt                                                                                                                                    <  8:199160/91‑1 (MQ=255)                                                                          aGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTttgtt                                                                                                                                    >  7:199160/1‑91 (MQ=255)                                                                              gtgtAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACAcc                                                                                  >  3:1350/1‑137 (MQ=255)                                                                              gtgtAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACAcc                                                                                  <  4:1350/137‑1 (MQ=255)                                                                                 tAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAAc                                                                   <  3:145756/149‑1 (MQ=255)                                                                                 tAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAAc                                                                   >  4:12206/1‑149 (MQ=255)                                                                                   gCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCGGCCCAAACAAAAACCTCATGGCGAACACCCCGCCCAAACGCAAccc                                                                 <  1:15518/149‑1 (MQ=255)                                                                                    cAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGCGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAAcccc                                                                >  4:322185/1‑149 (MQ=255)                                                                                      aTAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAAccccc                                                               >  7:106001/1‑148 (MQ=255)                                                                                       tAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCaa                                                             <  3:45288/149‑1 (MQ=255)                                                                                       tAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCATGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAAccccc                                                               >  3:10940/1‑147 (MQ=255)                                                                                         gCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAgg                                                           <  8:237847/149‑1 (MQ=255)                                                                                          ccGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGc                                                          >  1:93437/1‑149 (MQ=255)                                                                                          ccGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGc                                                          <  4:332145/149‑1 (MQ=255)                                                                                             tGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCTCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGaa                                                       <  7:110646/149‑1 (MQ=255)                                                                                                   agaTGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGAACACCCa                                                 <  7:287896/149‑1 (MQ=255)                                                                                                       gggggTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTg                                                                                                                                             >  6:23170/1‑53 (MQ=255)                                                                                                       gggggTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTg                                                                                                                                             <  5:23170/53‑1 (MQ=255)                                                                                                              tgggtttgACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGAACACCCAGCCCAAACAt                                       <  8:106001/148‑1 (MQ=255)                                                                                                                ggtttgACTTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCACGCCCAAACGCAACCCCCAAGGCGAACACCCAGCCCAAACATCa                                     <  7:305482/148‑1 (MQ=255)                                                                                                                        gTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGAACACCCAGCCCAAACATCAATCCTCCGc                            >  4:66968/1‑149 (MQ=255)                                                                                                                            gATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCACGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGAACGCGCAGCCCCAACATCACTCCTCCGGCTgg                        >  4:273322/1‑149 (MQ=255)                                                                                                                               tGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCTGAGATCGAGCGCCGCCCAAACAAAAACCTCAATGCGAACACCCCGCCCAAACGAAAACCCCAAGGAGAACACACATCCCAAACATCAATCATCCCCCTGGtac                     >  2:280892/1‑147 (MQ=255)                                                                                                                               tGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGAACACCCAGCCCAAACATCAATCCTCCGCCTGGTc                      >  5:51696/1‑148 (MQ=255)                                                                                                                                 cGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGAACACCCAGCCCAAACATCAATCCTCCGCCTGGTCCTc                   >  7:85170/1‑149 (MQ=255)                                                                                                                                             gaAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGAACACCCAGCCCAAACATCAATCCTCCGCCTGGTCCTCACCGCCCTggcg       <  8:85170/149‑1 (MQ=255)                                                                                                                                              aaGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGAACACCCAGCCCAAACATCAATCCTCCGCCTGGTCCTCACCGCCCTggcgg      <  3:43241/149‑1 (MQ=255)                                                                                                                                               aGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGAACACCCAGCCCAAACATCAATCCTCCGCCTGGTCCTCACCGCCCTggcggc     <  6:51696/149‑1 (MQ=255)                                                                                                                                                  GTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGAACACCCAGCCCAAACATCAATCCTCCGCCTGGTCCTCACCGCCCTGGCGGCTCa  <  4:221084‑M1/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GCTCGGGATACGTGGGCGGCCTGGGGCATCGTGCTCTCTCGCGTGGCTGACCGTCATAAAACGGTGTGTTGCCAGCGGTGTAGCAATAGCCGTGCCGGAGATGGGGGTTTGGGTTTGACGTAGGATTGCGTTAAGACCGAGAAGGGTTCGCCGTGAGTTTTGTTGTGCCGCGGAGATCGAGCGCCGCCCAAACAAAAACCTCAAGGCGAACACCCCGCCCAAACGCAACCCCCAAGGCGAACACCCAGCCCAAACATCAATCCTCCGCCTGGTCCTCACCGCCCTGGCGGCTCA  >  NC_002947/4963626‑4963919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.