New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5693247	71 (1.180)	4 (0.070)	3/262	NT	5.2%	coding (547/570 nt)	PP_4995	exopolysaccharide biosynthesis protein
	?	NC_002947	= 5693277	75 (1.270)					coding (8/426 nt)	PP_4996	Holliday junction resolvase

GGAAGCGGGCCAACTGGAAGCGGAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACC  >  NC_002947/5693105‑5693394                                                                                                                                                |                                                                                                                                                    ggAAGCGGGCCAACTGGAAGCGGAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGAccagcc                                                                                                                                               <  3:145856/149‑1 (MQ=255)  gAAGCGGGCCAACTGGAAGCGGAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGAccagc                                                                                                                                                >  7:229882/1‑147 (MQ=255)     gCGGGCCAACTGGAAGCGGAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGc                                                                                                                                           >  2:208246/1‑149 (MQ=255)           cAACTGGAAGCGGAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCa                                                                                                                                     >  5:219654/1‑149 (MQ=255)             aCTGGAAGCGGAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACg                                                                                                                                   >  3:23701/1‑149 (MQ=255)                 gAAGCGGAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTGGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCt                                                                                                                                <  7:243112/148‑1 (MQ=255)                   aGCGGAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGAt                                                                                                                             <  7:11260/149‑1 (MQ=255)                   aGCGGAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGAt                                                                                                                             <  5:255384/149‑1 (MQ=255)                    gCGGAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGAccagccaggcgtggcccgcctggct                                                                                                                            <  7:75518‑M1/149‑26 (MQ=255)                      ggAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGc                                                                                                                          <  2:181183/149‑1 (MQ=255)                       gAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCt                                                                                                                         <  8:46523/149‑1 (MQ=255)                        aaCTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGAGCAGCCAGGCGGGCCACGCCTGATGGCTg                                                                                                                        <  1:208246/149‑1 (MQ=255)                           tGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGAtc                                                                                                                     <  5:81285‑M2/149‑3 (MQ=255)                             gCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGAtc                                                                                                                     >  6:2205‑M2/1‑145 (MQ=255)                             gCCGACAACGCCTAGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTa                                                                                                                   <  7:100264/149‑1 (MQ=255)                                gACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGAtcagccatcaggcgtggcccgcctggctggtcagcag                                                                                                                <  2:171710‑M1/149‑38 (MQ=255)                                gACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGc                                                                                                                >  3:280143/1‑149 (MQ=255)                                 aCAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGcc                                                                                                               >  7:340732/1‑149 (MQ=255)                                  cAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCct                                                                                                              <  6:219654/149‑1 (MQ=255)                                   aaCGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCctg                                                                                                             >  5:202444/1‑149 (MQ=255)                                       ccTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCctgctgc                                                                                                         >  4:174528/1‑149 (MQ=255)                                           gCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCctgctgctg                                                                                                       <  6:81285/147‑1 (MQ=255)                                           gCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCctgctgctg                                                                                                       <  8:340732/147‑1 (MQ=255)                                           gCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTggg                                                                                                     >  5:196090/1‑149 (MQ=255)                                           gCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTgg                                                                                                      <  3:174528/148‑1 (MQ=255)                                             tGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCt                                                                                                   >  2:224475/1‑149 (MQ=255)                                                 cTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGa                                                                                               >  7:211982/1‑149 (MQ=255)                                                  tGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGAc                                                                                              <  7:148913/149‑1 (MQ=255)                                                  tGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGAGGATCTACGCCTGCTGCTGGGCTTCGAc                                                                                              >  8:128593/1‑149 (MQ=255)                                                    cccGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACt                                                                                             <  5:328513/148‑1 (MQ=255)                                                       gTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATgg                                                                                         <  1:124555/149‑1 (MQ=255)                                                            aCCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATgg                                                                                         >  2:94441/1‑144 (MQ=255)                                                            aCCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATgg                                                                                         <  1:94441/144‑1 (MQ=255)                                                            aCCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGgcagc                                                                                     >  1:212507/1‑148 (MQ=255)                                                            aCCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGgcagc                                                                                     >  4:178856/1‑148 (MQ=255)                                                            aCCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCAGGGGATCAACCAGCACCTGCTGACCAGCCAGGCTGGCCACGCCTGATGGCTGATATACTCCTGCTCCTGGGCTTCGAGTATGgcagc                                                                                     >  4:132493/1‑148 (MQ=255)                                                              ccGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCaaa                                                                                  >  6:84120/1‑149 (MQ=255)                                                              ccGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCaaa                                                                                  >  5:250240/1‑149 (MQ=255)                                                                ggAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACa                                                                                <  6:250240/149‑1 (MQ=255)                                                                   aaTCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGAt                                                                             <  2:3139/149‑1 (MQ=255)                                                                        tCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCg                                                                        >  6:42752/1‑149 (MQ=255)                                                                        tCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCg                                                                        <  2:212507/149‑1 (MQ=255)                                                                          ttCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTg                                                                      >  3:190580/1‑149 (MQ=255)                                                                            cGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGGTTCGACTATGGCAGCAAACAGATCGGCGTgg                                                                     <  1:40270/148‑1 (MQ=255)                                                                            cGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTgg                                                                     <  3:113466/148‑1 (MQ=255)                                                                            cGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTg                                                                      <  5:84120/147‑1 (MQ=255)                                                                             tccccaggctggcggccgcagcctcaaggcgcaggtcgctggccTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCaaa                                                                                  <  8:105729‑M2/91‑1 (MQ=255)                                                                             tccccaggctggcggccgcagcctcaaggcgcaggtcgctggccTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCaaa                                                                                  >  7:105729‑M2/45‑135 (MQ=255)                                                                                 tGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCg                                                               <  8:211982/149‑1 (MQ=255)                                                                                 caggctggcggccgcagcctcaaggcgcaggtcgctggccTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTc                                                                >  5:185966‑M2/41‑149 (MQ=255)                                                                                  GGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAg                                                                               >  3:348259‑M1/1‑132 (MQ=255)                                                                                  GGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAg                                                                               <  4:348259‑M1/132‑1 (MQ=255)                                                                                   GCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGc                                                             >  4:280143‑M1/1‑149 (MQ=255)                                                                                     cAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGc                                                             >  3:324749/1‑147 (MQ=255)                                                                                     cAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGc                                                             >  6:3950/1‑147 (MQ=255)                                                                                     cAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGc                                                             >  6:109600/1‑147 (MQ=255)                                                                                     cAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGc                                                             >  4:30063/1‑147 (MQ=255)                                                                                      aGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAg                                                          <  4:23701/149‑1 (MQ=255)                                                                                            cTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGAt                                                     >  1:36963/1‑148 (MQ=255)                                                                                             tGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGAtcagccatcaggcgtggcccgcctggctg                                                                                                                        >  3:288330‑M1/1‑51 (MQ=255)                                                                                             tGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGAtcagccatcaggcgtggcccgcctggctg                                                                                                                        <  4:288330‑M1/80‑30 (MQ=255)                                                                                                 tccccaGGCTGGCGGCCG‑CAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCCCGCCGGATGGCTGCTCTACGCCTGCTGCGGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCgg                                               >  1:285861/6‑149 (MQ=255)                                                                                                  cTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGc                                              >  4:272228/1‑149 (MQ=255)                                                                                                  cTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGc                                              >  7:162080/1‑149 (MQ=255)                                                                                                   ttGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGc                                              >  5:41878/1‑148 (MQ=255)                                                                                                     gAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCa                                            <  6:196090/148‑1 (MQ=255)                                                                                                       ggCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGc                                         >  6:327196/1‑149 (MQ=255)                                                                                                        gCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCGGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGcc                                        >  8:93604/1‑149 (MQ=255)                                                                                                               gccgccAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGaa                                  <  3:272228/149‑1 (MQ=255)                                                                                                                 cgccAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACt                                >  4:317512/1‑149 (MQ=255)                                                                                                                  gccAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACtg                               <  8:162080/149‑1 (MQ=255)                                                                                                                      gccTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCa                           >  3:39185‑M2/4‑149 (MQ=255)                                                                                                                      gccTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCa                           <  5:42752‑M2/146‑1 (MQ=255)                                                                                                                             gATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTg                      >  4:78631/1‑147 (MQ=255)                                                                                                                                 aaCCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGgcg                <  3:78631/149‑1 (MQ=255)                                                                                                                                  acctgcacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGc                            >  3:269281/1‑136 (MQ=255)                                                                                                                                  acctgcacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGc                            <  4:269281/136‑1 (MQ=255)                                                                                                                                  acctgcacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCACGCCCGCGAACTCTGCACCCAGAAGgcg                >  8:332493/1‑148 (MQ=255)                                                                                                                                   cctgcacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCTACTATGGCATCAAACAGATCGGCGTGGCCGGCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCTCa              <  6:202444/149‑1 (MQ=255)                                                                                                                                    ctgcacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGgcg                >  6:140533/1‑146 (MQ=255)                                                                                                                                       cacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAg                                           >  5:232580/1‑116 (MQ=255)                                                                                                                                       cacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAg                                           <  6:232580/116‑1 (MQ=255)                                                                                                                                        acctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACg         <  4:190580/149‑1 (MQ=255)                                                                                                                                         cctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACgg        >  3:356844/1‑149 (MQ=255)                                                                                                                                          ctgctgACCAGCCAGGCGGGCCACGCCTGATGGCTGAtcagcaggtgcaggttgatccccaggctggcggccgcagcctcaaggcgcaggtcgctggccatgccgaagacgatttccgggtcgaacgggcagttcagccaggcgttgtc       <  2:171710‑M2/149‑113 (MQ=255)                                                                                                                                          ctgctgACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGc       >  7:210368/1‑149 (MQ=255)                                                                                                                                          ctgctgACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGc       <  6:41878/149‑1 (MQ=255)                                                                                                                                               gAtcagccatcaggcgtggcccgcctggctggtcagcaggtgcaggttgatccccaggctggcggccgcagcctcaaggcgcaggtcgctggccatgccgaagacgatttccgggtcgaacgggcagttcagccaggcgttgtcggcca  <  5:81285‑M1/149‑148 (MQ=255)                                                                                                                                               gAtcagccatcaggcgtggcccgcctggctggtcagcaggtgcaggttgatccccaggctggcggccgcagcctcaaggcgcaggtcgctggccatgccgaagacgatttccgggtcgaacgggcagttcagccaggcgttgtcggc    >  6:2205‑M1/1‑2 (MQ=255)                                                                                                                                                |                                                                                                                                                    GGAAGCGGGCCAACTGGAAGCGGAACTGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACC  >  NC_002947/5693105‑5693394

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.