New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5693247	71 (1.180)	4 (0.070)	3/262	NT	5.2%	coding (547/570 nt)	PP_4995	exopolysaccharide biosynthesis protein
	?	NC_002947	= 5693277	75 (1.270)					coding (8/426 nt)	PP_4996	Holliday junction resolvase

TGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTGGAAAAGCTGATTGC  >  NC_002947/5693131‑5693424                                                                                                                                                    |                                                                                                                                                     tGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGAtc                                                                                                                                                    <  5:81285‑M2/149‑3 (MQ=255)   gCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGAtc                                                                                                                                                    >  6:2205‑M2/1‑145 (MQ=255)   gCCGACAACGCCTAGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTa                                                                                                                                                  <  7:100264/149‑1 (MQ=255)      gACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGc                                                                                                                                               >  3:280143/1‑149 (MQ=255)       aCAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGcc                                                                                                                                              >  7:340732/1‑149 (MQ=255)        cAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCct                                                                                                                                             <  6:219654/149‑1 (MQ=255)         aaCGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCctg                                                                                                                                            >  5:202444/1‑149 (MQ=255)             ccTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCctgctgc                                                                                                                                        >  4:174528/1‑149 (MQ=255)                 gCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCctgctgctg                                                                                                                                      <  8:340732/147‑1 (MQ=255)                 gCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCctgctgctg                                                                                                                                      <  6:81285/147‑1 (MQ=255)                 gCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTggg                                                                                                                                    >  5:196090/1‑149 (MQ=255)                 gCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTgg                                                                                                                                     <  3:174528/148‑1 (MQ=255)                   tGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCt                                                                                                                                  >  2:224475/1‑149 (MQ=255)                       cTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGa                                                                                                                              >  7:211982/1‑149 (MQ=255)                        tGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGAc                                                                                                                             <  7:148913/149‑1 (MQ=255)                        tGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGAGGATCTACGCCTGCTGCTGGGCTTCGAc                                                                                                                             >  8:128593/1‑149 (MQ=255)                          cccGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACt                                                                                                                            <  5:328513/148‑1 (MQ=255)                             gTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATgg                                                                                                                        <  1:124555/149‑1 (MQ=255)                                  aCCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATgg                                                                                                                        >  2:94441/1‑144 (MQ=255)                                  aCCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATgg                                                                                                                        <  1:94441/144‑1 (MQ=255)                                  aCCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGgcagc                                                                                                                    >  1:212507/1‑148 (MQ=255)                                  aCCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGgcagc                                                                                                                    >  4:178856/1‑148 (MQ=255)                                  aCCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCAGGGGATCAACCAGCACCTGCTGACCAGCCAGGCTGGCCACGCCTGATGGCTGATATACTCCTGCTCCTGGGCTTCGAGTATGgcagc                                                                                                                    >  4:132493/1‑148 (MQ=255)                                    ccGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCaaa                                                                                                                 >  5:250240/1‑149 (MQ=255)                                    ccGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCaaa                                                                                                                 >  6:84120/1‑149 (MQ=255)                                      ggAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACa                                                                                                               <  6:250240/149‑1 (MQ=255)                                         aaTCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GAt                                                                                                           <  2:3139/149‑1 (MQ=255)                                              tCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCg                                                                                                      <  2:212507/149‑1 (MQ=255)                                              tCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCg                                                                                                      >  6:42752/1‑149 (MQ=255)                                                ttCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTg                                                                                                    >  3:190580/1‑149 (MQ=255)                                                  cGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGGTTCGACTATGGCAGCAAACA‑GATCGGCGTgg                                                                                                   <  1:40270/148‑1 (MQ=255)                                                  cGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTgg                                                                                                   <  3:113466/148‑1 (MQ=255)                                                  cGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTg                                                                                                    <  5:84120/147‑1 (MQ=255)                                                   tccccaggctggcggccgcagcctcaaggcgcaggtcgctggccTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCaaa                                                                                                                 >  7:105729‑M2/45‑135 (MQ=255)                                                   tccccaggctggcggccgcagcctcaaggcgcaggtcgctggccTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCaaa                                                                                                                 <  8:105729‑M2/91‑1 (MQ=255)                                                       tGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCg                                                                                             <  8:211982/149‑1 (MQ=255)                                                       caggctggcggccgcagcctcaaggcgcaggtcgctggccTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTc                                                                                              >  5:185966‑M2/41‑149 (MQ=255)                                                        GGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑g                                                                                                             >  3:348259‑M1/1‑132 (MQ=255)                                                        GGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑g                                                                                                             <  4:348259‑M1/132‑1 (MQ=255)                                                         GCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGc                                                                                           >  4:280143‑M1/1‑149 (MQ=255)                                                           cAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGc                                                                                           >  6:109600/1‑147 (MQ=255)                                                           cAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGc                                                                                           >  4:30063/1‑147 (MQ=255)                                                           cAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGc                                                                                           >  3:324749/1‑147 (MQ=255)                                                           cAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGc                                                                                           >  6:3950/1‑147 (MQ=255)                                                            aGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAg                                                                                        <  4:23701/149‑1 (MQ=255)                                                                  cTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGAt                                                                                   >  1:36963/1‑148 (MQ=255)                                                                       tccccaGGCTGGCGGCCG‑CAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCCCGCCGGATGGCTGCTCTACGCCTGCTGCGGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCgg                                                                             >  1:285861/6‑149 (MQ=255)                                                                        cTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGc                                                                            >  4:272228/1‑149 (MQ=255)                                                                        cTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGc                                                                            >  7:162080/1‑149 (MQ=255)                                                                         ttGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGc                                                                            >  5:41878/1‑148 (MQ=255)                                                                           gAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCa                                                                          <  6:196090/148‑1 (MQ=255)                                                                             ggCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGc                                                                       >  6:327196/1‑149 (MQ=255)                                                                              gCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCGGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGcc                                                                      >  8:93604/1‑149 (MQ=255)                                                                                     gccgccAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGaa                                                                <  3:272228/149‑1 (MQ=255)                                                                                       cgccAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACt                                                              >  4:317512/1‑149 (MQ=255)                                                                                        gccAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACtg                                                             <  8:162080/149‑1 (MQ=255)                                                                                            gccTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCa                                                         >  3:39185‑M2/4‑149 (MQ=255)                                                                                            gccTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCa                                                         <  5:42752‑M2/146‑1 (MQ=255)                                                                                                   gATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTg                                                    >  4:78631/1‑147 (MQ=255)                                                                                                       aaCCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGgcg                                              <  3:78631/149‑1 (MQ=255)                                                                                                        acctgcacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGc                                                          >  3:269281/1‑136 (MQ=255)                                                                                                        acctgcacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGc                                                          <  4:269281/136‑1 (MQ=255)                                                                                                        acctgcacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCACGCCCGCGAACTCTGCACCCAGAAGgcg                                              >  8:332493/1‑148 (MQ=255)                                                                                                         cctgcacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCTACTATGGCATCAAACA‑GATCGGCGTGGCCGGCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCTCa                                            <  6:202444/149‑1 (MQ=255)                                                                                                          ctgcacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGgcg                                              >  6:140533/1‑146 (MQ=255)                                                                                                             cacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAg                                                                         >  5:232580/1‑116 (MQ=255)                                                                                                             cacctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAg                                                                         <  6:232580/116‑1 (MQ=255)                                                                                                              acctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACg                                       <  4:190580/149‑1 (MQ=255)                                                                                                               cctgcTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACgg                                      >  3:356844/1‑149 (MQ=255)                                                                                                                ctgctgACCAGCCAGGCGGGCCACGCCTGATGGCTGAtcagcaggtgcaggttgatccccaggctggcggccgcagcctcaaggcgcaggtcgctggccatgccgaagacgatttccgggtcgaacgggcagttcagccaggcgttgtc                                      <  2:171710‑M2/149‑113 (MQ=255)                                                                                                                ctgctgACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGc                                     <  6:41878/149‑1 (MQ=255)                                                                                                                ctgctgACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGc                                     >  7:210368/1‑149 (MQ=255)                                                                                                                        ccatcagGCGTGGCCCGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGa                             >  5:341543/5‑149 (MQ=255)                                                                                                                        cagccagGCGGGCCACGCCTGATGGCTGAtcagcaggtgcaggttgatccccaggctggcggccgcagcctcaaggcgca                                                                                                   <  4:288330‑M2/80‑52 (MQ=255)                                                                                                                        cagccagGCGGGCCACGCCTGATGGCTGAtcagcaggtgcaggttgatccccaggctggcggccgcagcctcaaggcgca                                                                                                   >  3:288330‑M2/1‑29 (MQ=255)                                                                                                                        cagccagGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGa                             >  1:79847/1‑149 (MQ=255)                                                                                                                         agccagGCGGGCCACGCCTG‑‑‑GCTGGtcagcaggtgcaggttgatccccaggctggcggccgcagcctcaaggcgcaggtcgctggccatgccgaagacgatttccgggtcgaacgggcagttcagccaggcgttgtcggccagttccgc                          <  7:75518‑M2/149‑125 (MQ=255)                                                                                                                          atcagGCGTGGCCCGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACt                           >  3:351034/3‑149 (MQ=255)                                                                                                                          atcagGCGTGGCCCGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACt                           >  2:187320/3‑149 (MQ=255)                                                                                                                             agGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTggg                        <  2:36963/149‑1 (MQ=255)                                                                                                                             agGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTggg                        <  4:356844/149‑1 (MQ=255)                                                                                                                                cGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGccc                     <  4:39185/149‑1 (MQ=255)                                                                                                                                 gggCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGcc                      >  6:20632/1‑147 (MQ=255)                                                                                                                                  ggCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAg                   <  3:317512/149‑1 (MQ=255)                                                                                                                                     cACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACAGGATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGt                 >  1:102526/1‑149 (MQ=255)                                                                                                                                     cACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTg                <  6:185966/149‑1 (MQ=255)                                                                                                                                          cTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTGGaaaa           <  4:324749/149‑1 (MQ=255)                                                                                                                                           tGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTGGAAAAg          >  2:222679/1‑149 (MQ=255)                                                                                                                                           tGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTGGAAAAg          >  1:156092/1‑149 (MQ=255)                                                                                                                                            gATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTGGAAAAGc         >  5:324058/1‑149 (MQ=255)                                                                                                                                             aTGGCTGATCTACGCCGGCTGCTGGGCTTCGACTCTGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACGGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTGGAAAAGc         <  2:285861/148‑1 (MQ=255)                                                                                                                                                 cTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTGGAAAAGCTGAtt    <  4:351034/149‑1 (MQ=255)                                                                                                                                                 cTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTGGAAAAGCTGAtt    <  1:187320/149‑1 (MQ=255)                                                                                                                                                 cTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGACGTCGGCCAGGTGCTTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTAGGCCCAGGTGGAAAAGCTGAtt    >  5:259990/1‑149 (MQ=255)                                                                                                                                                   gATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTGGaaaa           <  2:59240/140‑1 (MQ=255)                                                                                                                                                   gATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTGGaaaa           >  1:59240/1‑140 (MQ=255)                                                                                                                                                    aTCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTGGAAAAGCTGATTGc  <  5:109600/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     TGGCCGACAACGCCTGGCTGAACTGCCCGTTCGACCCGGAAATCGTCTTCGGCATGGCCAGCGACCTGCGCCTTGAGGCT‑GCGGCCGCCAGCCTGGGGATCAACCTGCACCTGCTGACCAGCCAGGCGGGCCACGCCTGATGGCTGATCTACGCCTGCTGCTGGGCTTCGACTATGGCAGCAAACA‑GATCGGCGTGGCCGTCGGCCAGGTGATTACCGGCCAGGCCCGCGAACTGTGCACCCTGAAGGCGCAGAACGGCGTACCGGACTGGGCCCAGGTGGAAAAGCTGATTGC  >  NC_002947/5693131‑5693424

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.