New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5780398 =	66 (1.100)	4 (0.070)	3/256	NT	6.0%	coding (702/1794 nt)	cvrA	K(+)/H(+) antiporter NhaP
	?	NC_002947	5780439 =	62 (1.070)					coding (743/1794 nt)	cvrA	K(+)/H(+) antiporter NhaP

CTGTCACCTTGATCGACATGATCGCCAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGCAACAAGCCTATCCGCAGCCGCCATGGCA  >  NC_002947/5780250‑5780543                                                                                                                                                     |                                                                                                                                                  ccgatctgggccagccaggccatgccgtcgagcatgtgcaggatgccatggcggctgcggataggcttgttgccaagcaccaggccgcacaggtaaacggcgaggaagccgctaccatgcagggcgttggtcagcgagaacattaccag                                                                                                                                                   >  8:59035‑M1/149‑149 (MQ=255)  cgatctgggccagccaggccatgccgtcgagcatgtgcaggatgccatggcggctgcggataggcttgttgccaagcaccaggccgcacaggtaaacggcgaggaagccgctaccatgcagggcgttggtcagcgagaacattaccagg                                                                                                                                                  <  6:358420‑M1/2‑1 (MQ=255)     tctgggccagccaggccatgccgtcgagcatgtgcaggatgccatggcggctgcggataggcttgttgccaagcaccaggccgcacaggtaaacggcgaggaagccgctaccatgcagggcgttggtcagcgagaacattaccaGGCcg                                                                                                                                               <  6:223512‑M1/5‑1 (MQ=255)      aCCTTGATCGACATGATCGCCAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCcgg                                                                                                                                              >  5:280449/1‑149 (MQ=255)        gggccagccaggccatgccgtcgagcatgtgcaggatgccatggcggctgcggataggcttgttgccaagcaccaggccgcacaggtaaacggcgaggaagccgctaccatgcagggcgttggtcagcgagaacattaccaGGCcggcg                                                                                                                                            <  4:159005‑M1/8‑1 (MQ=255)        cTTGATCGACATGATCGCCAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCcggcg                                                                                                                                            >  5:259264/1‑149 (MQ=255)         ttGATCGACATGATCGCCAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGCGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTACCCCGTATCAATCTGGCcggcgg                                                                                                                                           >  2:219464/1‑149 (MQ=255)         ggccagccaggccatgccgtcgagcatgtgcaggatgccatggcggctgcggataggcttgttgccaagcaccaggccgcacaggtaaacggcgaggaagccgctaccatgcagggcgttggtcagcgagaacattaccaGGc                                                                                                                                                 >  5:155194‑M1/141‑143 (MQ=255)            aTCGACATGATCGCCAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCt                                                                                                                                        >  8:122377/1‑149 (MQ=255)            aTCGACATGATCGCCAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCt                                                                                                                                        <  6:177969/149‑1 (MQ=255)                aCATGATCGCCAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTAc                                                                                                                                    >  5:351101/1‑149 (MQ=255)                    gATCGCCAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAAACTGGCCGGCGGCCTGTACCCCa                                                                                                                                >  1:80674/1‑149 (MQ=255)                        gCCAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCt                                                                                                                            >  4:166970/1‑149 (MQ=255)                          cAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTgg                                                                                                                          <  8:86135/149‑1 (MQ=255)                          cAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTgg                                                                                                                          <  4:99452/149‑1 (MQ=255)                          cAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTCGCCGGCGGCCTGTACACCATTCTgg                                                                                                                          >  6:243901/1‑149 (MQ=255)                            gcggcgAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTa                                                                                                                        <  4:236279/149‑1 (MQ=255)                                 gagaCCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGc                                                                                                                   >  3:101565/1‑149 (MQ=255)                                    aCCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCcgg                                                                                                                >  7:311182/1‑149 (MQ=255)                                     ccGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGTGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCcggc                                                                                                               >  8:100521/1‑149 (MQ=255)                                       ggCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCcggcgg                                                                                                             <  3:42095/149‑1 (MQ=255)                                        gCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCggcggc                                                                                                            <  8:66856/149‑1 (MQ=255)                                         ggatgccatggcggctgcggataggcttgttgccaagcaccaggccgcacaggtaaacggcgaggaagccgctaccatgcagggcgttggtcagcgagaacattaccaGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGcc                                                                                                           >  3:159005‑M1/109‑149 (MQ=255)                                           tGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTg                                                                                                         >  5:317591/1‑149 (MQ=255)                                           atgccatggcggctgcggataggcttgttgccaagcaccaggccgcacaggtaaacggcgaggaagccgctaccatgcagggcgttggtcagcgagaacattaccaGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTg                                                                                                         >  2:273182‑M1/107‑149 (MQ=255)                                             cACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTgg                                                                                                        <  4:28948/148‑1 (MQ=255)                                                  gAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAAt                                                                                                    <  6:259264/147‑1 (MQ=255)                                                   aGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGtt                                                                                                 <  5:319688/149‑1 (MQ=255)                                                            ggCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTg                                                                                                                     <  1:124129/120‑1 (MQ=255)                                                            ggCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTg                                                                                                                     >  2:124129/1‑120 (MQ=255)                                                            ggCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGa                                                                                         <  2:206525/148‑1 (MQ=255)                                                            ggCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGAc                                                                                        <  6:280449/149‑1 (MQ=255)                                                            ggCCACTTGCTGCGTGAGTTCGGGATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGa                                                                                         <  7:326148/148‑1 (MQ=255)                                                               cACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCaa                                                                                     >  1:320101/1‑149 (MQ=255)                                                                  ttGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCt                                                                                                                            <  8:66881/107‑1 (MQ=255)                                                                  ttGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCt                                                                                                                            >  7:66881/1‑107 (MQ=255)                                                                         gTGAGTTCGGTATCGGCATGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCAt                                                                           >  2:205951/1‑149 (MQ=255)                                                                          tGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATg                                                                          >  7:184427/1‑149 (MQ=255)                                                                          tGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATg                                                                          <  3:166970/149‑1 (MQ=255)                                                                          caagcaccaggccgcacaggtaaacggcgaggaagccgctaccatgcagggcgttggtcagcgagaacattaccaGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTg                                                                                                         <  7:129853‑M1/43‑1 (MQ=255)                                                                          caagcaccaggccgcacaggtaaacggcgaggaagccgctaccatgcagggcgttggtcagcgagaacattaccaGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTg                                                                                                         >  8:129853‑M1/76‑118 (MQ=255)                                                                           gAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATgg                                                                         <  2:25871/149‑1 (MQ=255)                                                                              ttCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTATTGTTCTCGCTGACCAACGCCCTGCATGGTAg                                                                      >  1:276772/1‑149 (MQ=255)                                                                               tCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGc                                                                     >  3:240197/1‑149 (MQ=255)                                                                                 ggTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCg                                                                    <  5:178344/148‑1 (MQ=255)                                                                                       ggCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTcc                                                              <  5:243901/148‑1 (MQ=255)                                                                                        gCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTc                                                            >  2:159680/1‑149 (MQ=255)                                                                                          aCGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGc                                                          >  5:223512/1‑149 (MQ=255)                                                                                                ctgggcctgggcGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGttt                                                     <  2:320101/148‑1 (MQ=255)                                                                                                ctgggcctgggcGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGttt                                                     <  1:205951/148‑1 (MQ=255)                                                                                                 tgggcctgggcGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTAc                                                   <  6:61223/149‑1 (MQ=255)                                                                                                 tgggcctgggcGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTAc                                                   >  1:154956/1‑149 (MQ=255)                                                                                                  gggcctgggcGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATACTGGTAGTGGCCGGCGGCCTGGTAATCTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTATAcc                                                  >  2:91460/1‑149 (MQ=255)                                                                                                   ggcctgggcGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTAc                                                   <  1:159680/147‑1 (MQ=255)                                                                                                   ggcctgggcGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCt                                                 >  5:148409/1‑149 (MQ=255)                                                                                                      ctgggcGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCtgtg                                              >  2:143797/1‑149 (MQ=255)                                                                                                       tgggcGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTTGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGc                                             <  7:122377/149‑1 (MQ=255)                                                                                                         ggcggcggcTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGc                                             <  2:181435/147‑1 (MQ=255)                                                                                                         ggcggcggcTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCg                                            <  7:114676/148‑1 (MQ=255)                                                                                                           cggcggcTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCTGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATTGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGcc                                         <  3:261514/149‑1 (MQ=255)                                                                                                           cggcggcTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGcc                                         >  5:153316/1‑149 (MQ=255)                                                                                                            ggcggcTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCt                                        <  8:184427/149‑1 (MQ=255)                                                                                                             gcggcTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTg                                       <  6:317591/149‑1 (MQ=255)                                                                                                               ggctggctGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCAGTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCtttacc                                            >  8:236725/1‑137 (MQ=255)                                                                                                                  tggctgATGCTGCGACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCt                                  >  2:103685/1‑149 (MQ=255)                                                                                                                     ctgATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTgg                               <  4:101565/149‑1 (MQ=255)                                                                                                                      tgATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTgg                               >  1:28479/1‑148 (MQ=255)                                                                                                                      tgATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGGAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTgg                               >  6:70867/1‑148 (MQ=255)                                                                                                                        aTGCTGCTACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGc                              <  1:103685/147‑1 (MQ=255)                                                                                                                          gctgcAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGcaac                           >  1:244076/1‑148 (MQ=255)                                                                                                                                        aCCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGCAACAAGCCTATCCGCAgc            >  5:300520/1‑149 (MQ=255)                                                                                                                                          cGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGCAACAAGCCTATCCGCAgccg          >  8:131406/1‑149 (MQ=255)                                                                                                                                            tATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGCAACAAGCCTATCCGCAgccgcc        <  2:154956/149‑1 (MQ=255)                                                                                                                                            tATCAATCTGGCCGGCGGCCTGGACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGCAACAAGCCTATCCGCAgccgc         >  7:234995/1‑148 (MQ=255)                                                                                                                                             aTCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTGCCTGTGCGGCCTGGTGCTTGGCAACCAGCCTATCCGCAGCCGCCa       >  8:270282/1‑149 (MQ=255)                                                                                                                                                aaTCTGGCCGGCGGCCTGTACCCGATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCTGCTTCCTCGCCGTGTACCTGTGCGGCCTGGTGCTTGGCAACAAGCCTATCCGCAGCCGCCATg     <  1:91460/148‑1 (MQ=255)                                                                                                                                                aaTCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGCAACAAGCCTATCCGCAGCCGCCATg     <  4:240197/148‑1 (MQ=255)                                                                                                                                                aaTCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGCAACAAGCCTATCCGCAGCCGCCATg     <  5:70867/148‑1 (MQ=255)                                                                                                                                                 aTCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTAc                                                   >  6:371924/1‑101 (MQ=255)                                                                                                                                                 aTCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTAc                                                   <  5:371924/101‑1 (MQ=255)                                                                                                                                                 aTCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGCAACAAGCCTATCCGCAGCCGCCAGGGc   >  1:135010/1‑149 (MQ=255)                                                                                                                                                  tCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGCAACAAGCCTATCCGCAGCCGCCATGGCa  >  4:366667/1‑149 (MQ=255)                                                                                                                                                  tCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGCAACAAGCCTATCCGCAGCCGCCATGGCa  >  5:358420/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                  CTGTCACCTTGATCGACATGATCGCCAGCGGCGAGACCGGCCTGCACTGGAGCCTGCTGGGCCACTTGCTGCGTGAGTTCGGTATCGGCACGCTGCTGGGCCTGGGCGGCGGCTGGCTGATGCTGCAACTGGTAAACCGTATCAATCTGGCCGGCGGCCTGTACCCCATTCTGGTAGTGGCCGGCGGCCTGGTAATGTTCTCGCTGACCAACGCCCTGCATGGTAGCGGCTTCCTCGCCGTTTACCTGTGCGGCCTGGTGCTTGGCAACAAGCCTATCCGCAGCCGCCATGGCA  >  NC_002947/5780250‑5780543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.