New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5805040 =	59 (0.980)	3 (0.050)	3/250	NT	5.7%	coding (169/882 nt)	PP_5083	type IV pili biogenesis protein PilM
	?	NC_002947	5805077 =	44 (0.780)					coding (132/882 nt)	PP_5083	type IV pili biogenesis protein PilM

AGCTGTGCCTCCAACTGCGCCCCGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCA  >  NC_002947/5804892‑5805185                                                                                                                                                     |                                                                                                                                                  cagcaaaggagtcgcgatgtttggacggttcggcaaggatgccggttcactcgtgggggtggaaattacgcccgacgccgttcggatcatgcaactgcagcagcgcaatcgacgctgccgtgtgatggggtcggcacaagagctgtttc                                                                                                                                                   >  1:215480‑M1/149‑149 (MQ=255)  agcaaaggagtcgcgatgtttggacgcttcggcaaggatgccggttcactcgtgggggtggaaattacgcccgacgccgttcggatcatgcaactgcagcagcgcaatcgacgctgccgtgtgatggggtcggcacaagagctgtttCa                                                                                                                                                  >  5:135467‑M1/148‑149 (MQ=255)   cTGTGCCTCCAACTGCGCCCCGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAg                                                                                                                                                 >  6:114620/1‑149 (MQ=255)   cTGTGCCTCCAACTGCGCCCCGCTCTGCTCCACCGGAAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAg                                                                                                                                                 >  2:262948/1‑149 (MQ=255)    caaaggagtcgcgatgtttggacgcttcggcaaggatgccggttcactcgtgggggtggaaattacgcccgacgccgttcggatcatgcaactgcagcagcgcaatcgacgctgccgtgtgatggggtcggcacaagagctgtttCAgg                                                                                                                                                >  4:90604‑M1/146‑149 (MQ=255)      tgCCTCCAACTGCGCCCCGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGgc                                                                                                                                               <  7:322297/148‑1 (MQ=255)      aaggagtcgcgatgtttggacgcttcggcaaggatgccggttcactcgtgggggtggaaattacgcccgacgccgttcggatcatgcaactgcagcagcgcaatcgacgctgccgtgtgatggggtcggcacaagagctgtttCAGgcg                                                                                                                                              >  6:231954‑M1/144‑149 (MQ=255)         cTCCAACTGCGCCCCGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCt                                                                                                                                           >  6:284902/1‑149 (MQ=255)               cTGCGCCCCGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGcc                                                                                                                                      >  7:22830/1‑148 (MQ=255)                  cgcCCCGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCa                                                                                                                                    <  4:190533/147‑1 (MQ=255)                  cgcCCCGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCa                                                                                                                                    <  6:214137/147‑1 (MQ=255)                   gcCCCGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGt                                                                                                                                  >  7:84029/1‑148 (MQ=255)                    ccccGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCa                                                                                                                                >  5:258473/1‑149 (MQ=255)                     cccGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGgc                                                                                                                                               >  8:99701/1‑133 (MQ=255)                     cccGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGgc                                                                                                                                               <  7:99701/133‑1 (MQ=255)                     cccGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCAt                                                                                                                               >  5:81941/1‑149 (MQ=255)                              cTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGa                                                                                                                                         <  4:117966/130‑1 (MQ=255)                              cTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGa                                                                                                                                         >  3:117966/1‑130 (MQ=255)                                ccACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAgcggc                                                                                                                    >  3:163287/1‑149 (MQ=255)                                      gCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTg                                                                                                               >  8:61175/1‑148 (MQ=255)                                      gCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTg                                                                                                               >  2:355710/1‑148 (MQ=255)                                      gCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGa                                                                                                              <  1:186587/149‑1 (MQ=255)                                        aGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGaaa                                                                                                            <  5:340553/149‑1 (MQ=255)                                        aGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGaaa                                                                                                            <  6:39976/149‑1 (MQ=255)                                         gccggttcactcgtgggggtggaaattacgcccgacgccgttcggatcatgcaactgcagcagcgcaatcgacgctgccgtgtgatgggggcggcacaagagctgtttCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAAc                                                                                                           >  8:280363‑M1/109‑149 (MQ=255)                                         gATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAAc                                                                                                           <  1:339868/149‑1 (MQ=255)                                         gATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAAc                                                                                                           <  7:24690/149‑1 (MQ=255)                                         gATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAAc                                                                                                           <  1:335448/149‑1 (MQ=255)                                              cacaACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGctc                                                                                                      >  5:98030/1‑149 (MQ=255)                                               acaACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGctct                                                                                                     <  6:98030/149‑1 (MQ=255)                                                   cTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTtgt                                                                                                  <  5:215248/148‑1 (MQ=255)                                                   cTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTtgt                                                                                                  >  6:215248/1‑148 (MQ=255)                                                   cTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCCGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTtgtg                                                                                                 <  5:320983/149‑1 (MQ=255)                                                              ccTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATc                                                                                      >  8:239555/1‑149 (MQ=255)                                                               cTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCAt                                                                                       <  4:335460/147‑1 (MQ=255)                                                               cTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCAt                                                                                       >  3:335460/1‑147 (MQ=255)                                                                tGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACa                                                                                                          <  7:319380/127‑1 (MQ=255)                                                                tGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACa                                                                                                          >  8:319380/1‑127 (MQ=255)                                                                  ttacgcccgacgccgttcggatcatgcaactgcagcagcgcaatcgacgctgccgtgtgatggggtcggcacaagagctgtttCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGcc                                                                                                                 >  1:142039‑M1/84‑118 (MQ=255)                                                                  ttacgcccgacgccgttcggatcatgcaactgcagcagcgcaatcgacgctgccgtgtgatggggtcggcacaagagctgtttCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGcc                                                                                                                 <  2:142039‑M1/35‑1 (MQ=255)                                                                    tGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACgg                                                                                >  1:202477/1‑149 (MQ=255)                                                                    tGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACgg                                                                                >  1:326918/1‑149 (MQ=255)                                                                      gCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACgg                                                                                >  1:223440/1‑147 (MQ=255)                                                                         ggCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGcc                                                                                                                 <  3:41823/111‑1 (MQ=255)                                                                         ggCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGcc                                                                                                                 >  4:41823/1‑111 (MQ=255)                                                                         ggCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCg                                                                           >  4:76114/1‑149 (MQ=255)                                                                          gCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGt                                                                          <  2:202477/149‑1 (MQ=255)                                                                             aTGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGa                                                                       <  8:84029/149‑1 (MQ=255)                                                                              tGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCa                                                                                        <  5:181749/131‑1 (MQ=255)                                                                              tGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCa                                                                                        >  6:181749/1‑131 (MQ=255)                                                                                     gcTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCgctg                                                               <  5:177731/149‑1 (MQ=255)                                                                                     gcTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCgctg                                                               <  1:355710/149‑1 (MQ=255)                                                                                         cccGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGctgctg                                                            >  6:162876/1‑148 (MQ=255)                                                                                                  gCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCAt                                                   >  2:313852/1‑148 (MQ=255)                                                                                                         gCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGaa                                           >  7:72457/1‑149 (MQ=255)                                                                                                          ccGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAAc                                          <  8:72457/149‑1 (MQ=255)                                                                                                           cGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGCCCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACg                                         >  1:350487/1‑149 (MQ=255)                                                                                                           cGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACg                                         <  1:313852/149‑1 (MQ=255)                                                                                                                  ccGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCgg                                  <  6:81941/149‑1 (MQ=255)                                                                                                                    ggTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCTGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGc                                <  3:76114/149‑1 (MQ=255)                                                                                                                           tCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAAttt                         >  1:73965/1‑149 (MQ=255)                                                                                                                                 cagcgcagcCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCAccc                   <  5:284902/149‑1 (MQ=255)                                                                                                                                     gcagcCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCAc               <  1:262948/149‑1 (MQ=255)                                                                                                                                       agcCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGa             <  5:114620/149‑1 (MQ=255)                                                                                                                                       agcCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGa             <  4:288134/149‑1 (MQ=255)                                                                                                                                       agcCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGa             <  6:258473/149‑1 (MQ=255)                                                                                                                                             caccaccCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGt                                                        <  1:355368/100‑1 (MQ=255)                                                                                                                                             caccaccCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGt                                                        >  2:355368/1‑100 (MQ=255)                                                                                                                                             caccaccCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAAc       >  6:233953/1‑149 (MQ=255)                                                                                                                                               ccaccCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCg     <  2:326918/149‑1 (MQ=255)                                                                                                                                               ccaccCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCg     <  5:233953/149‑1 (MQ=255)                                                                                                                                                 accCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGc   <  5:162876/149‑1 (MQ=255)                                                                                                                                                  ccccAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCa  >  5:12004/1‑149 (MQ=255)                                                                                                                                                  ccccAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCa  >  4:43435/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                  AGCTGTGCCTCCAACTGCGCCCCGCTCTGCTCCACCGGCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCA  >  NC_002947/5804892‑5805185

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.