New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5805040 =	59 (0.980)	3 (0.050)	3/250	NT	5.7%	coding (169/882 nt)	PP_5083	type IV pili biogenesis protein PilM
	?	NC_002947	5805077 =	44 (0.780)					coding (132/882 nt)	PP_5083	type IV pili biogenesis protein PilM

GCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCATCCTTGCCGAAGCGTCCAAACATCGCGACTCCTTTGCTG  >  NC_002947/5804929‑5805224                                                                                                                                                     |                                                                                                                                                    gCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGa                                                                                                                                                     <  1:186587/149‑1 (MQ=255)   aGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGaaa                                                                                                                                                   <  5:340553/149‑1 (MQ=255)   aGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGaaa                                                                                                                                                   <  6:39976/149‑1 (MQ=255)    gccggttcactcgtgggggtggaaattacgcccgacgccgttcggatcatgcaactgcagcagcgcaatcgacgctgccgtgtgatgggggcggcacaagagctgtttCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAAc                                                                                                                                                  >  8:280363‑M1/109‑149 (MQ=255)    gATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAAc                                                                                                                                                  <  7:24690/149‑1 (MQ=255)    gATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAAc                                                                                                                                                  <  1:339868/149‑1 (MQ=255)    gATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAAc                                                                                                                                                  <  1:335448/149‑1 (MQ=255)         cacaACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGctc                                                                                                                                             >  5:98030/1‑149 (MQ=255)          acaACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGctct                                                                                                                                            <  6:98030/149‑1 (MQ=255)              cTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTtgt                                                                                                                                         >  6:215248/1‑148 (MQ=255)              cTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTtgt                                                                                                                                         <  5:215248/148‑1 (MQ=255)              cTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCCGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTtgtg                                                                                                                                        <  5:320983/149‑1 (MQ=255)                         ccTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATc                                                                                                                             >  8:239555/1‑149 (MQ=255)                          cTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCAt                                                                                                                              >  3:335460/1‑147 (MQ=255)                          cTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCAt                                                                                                                              <  4:335460/147‑1 (MQ=255)                           tGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACa                                                                                                                                                 <  7:319380/127‑1 (MQ=255)                           tGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACa                                                                                                                                                 >  8:319380/1‑127 (MQ=255)                               tGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACgg                                                                                                                       >  1:326918/1‑149 (MQ=255)                               tGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACgg                                                                                                                       >  1:202477/1‑149 (MQ=255)                                 gCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACgg                                                                                                                       >  1:223440/1‑147 (MQ=255)                                    ggCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCg                                                                                                                  >  4:76114/1‑149 (MQ=255)                                     gCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGt                                                                                                                 <  2:202477/149‑1 (MQ=255)                                        aTGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGa                                                                                                              <  8:84029/149‑1 (MQ=255)                                         tGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCa                                                                                                                               >  6:181749/1‑131 (MQ=255)                                         tGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCa                                                                                                                               <  5:181749/131‑1 (MQ=255)                                                gcTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCgctg                                                                                                      <  1:355710/149‑1 (MQ=255)                                                gcTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCgctg                                                                                                      <  5:177731/149‑1 (MQ=255)                                                    cccGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGctgctg                                                                                                   >  6:162876/1‑148 (MQ=255)                                                             gCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCAt                                                                                          >  2:313852/1‑148 (MQ=255)                                                                    gCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGaa                                                                                  >  7:72457/1‑149 (MQ=255)                                                                     ccGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAAc                                                                                 <  8:72457/149‑1 (MQ=255)                                                                      cGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGCCCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACg                                                                                >  1:350487/1‑149 (MQ=255)                                                                      cGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACg                                                                                <  1:313852/149‑1 (MQ=255)                                                                             ccGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCgg                                                                         <  6:81941/149‑1 (MQ=255)                                                                               ggTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCTGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGc                                                                       <  3:76114/149‑1 (MQ=255)                                                                                      tCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAAttt                                                                >  1:73965/1‑149 (MQ=255)                                                                                            cagcgcagcCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCAccc                                                          <  5:284902/149‑1 (MQ=255)                                                                                                gcagcCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCAc                                                      <  1:262948/149‑1 (MQ=255)                                                                                                  agcCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGa                                                    <  6:258473/149‑1 (MQ=255)                                                                                                  agcCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGa                                                    <  5:114620/149‑1 (MQ=255)                                                                                                  agcCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGa                                                    <  4:288134/149‑1 (MQ=255)                                                                                                        caccaccCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGt                                                                                               >  2:355368/1‑100 (MQ=255)                                                                                                        caccaccCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGt                                                                                               <  1:355368/100‑1 (MQ=255)                                                                                                        caccaccCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAAc                                              >  6:233953/1‑149 (MQ=255)                                                                                                          ccaccCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCg                                            <  2:326918/149‑1 (MQ=255)                                                                                                          ccaccCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCg                                            <  5:233953/149‑1 (MQ=255)                                                                                                            gtttcaggcgccgctggccgatgactgggctcaggcgcctgAAACAGCTCTTGTGCCGCCCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGc                                          >  8:280363‑M2/42‑149 (MQ=255)                                                                                                            accCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGc                                          <  5:162876/149‑1 (MQ=255)                                                                                                             ccccAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCa                                         >  5:12004/1‑149 (MQ=255)                                                                                                             ccccAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCa                                         >  4:43435/1‑149 (MQ=255)                                                                                                                  ggcgccgctggccgatgactgggctcaggcgcctgAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTaa                                                                   >  1:142039‑M2/36‑118 (MQ=255)                                                                                                                  ggcgccgctggccgatgactgggctcaggcgcctgAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTaa                                                                   <  2:142039‑M2/83‑1 (MQ=255)                                                                                                                       CTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCATCCTTGCCg                                <  6:376726‑M1/148‑1 (MQ=255)                                                                                                                        tGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCATCCTTGCCg                                >  6:294347/1‑147 (MQ=255)                                                                                                                          aGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCATCCTTGCCGAAGc                            <  4:109539/149‑1 (MQ=255)                                                                                                                             ccAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCATCCTTGCCGAAGCGTc                         >  8:130210/1‑149 (MQ=255)                                                                                                                                       gCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCATCCTTGCCGAAGCGTCCAAACATcgc               >  8:325580/1‑149 (MQ=255)                                                                                                                                               cgcctgAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCATCCTTGCCGAAGCGTCCAAACATCGCGACTCCtt       >  6:231954‑M2/7‑149 (MQ=255)                                                                                                                                                 cctgAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCATCCTTGCCGAAGCGTCCAAACATCGCGACTCCTTTg     >  4:90604‑M2/5‑149 (MQ=255)                                                                                                                                                   tgAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCATCCTTGCCGAAGCGTCCAAACATCGCGACTCCTTTGCt   >  5:135467‑M2/3‑149 (MQ=255)                                                                                                                                                    gAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCATCCTTGCCGAACCGTCCAAACATCGCGACTCCTTTGCTg  >  1:215480‑M2/2‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCAGATGGCACAACTTGCAGATAACCTGACTGGCCGGCAATGCCAGCGCTACCCGGCGTTGCCTGAGGCCGCTGCGCCGGTAAGCTCGCTGCAGCGCAGCCACCACCACCCCAGGCGCCTGAGCCCAGTCATCGGCCAGCGGCGCCTGAAACAGCTCTTGTGCCGACCCCATCACACGGCAGCGTCGATTGCGCTGCTGCAGTTGCATGATCCGAACGGCGTCGGGCGTAATTTCCACCCCCACGAGTGAACCGGCATCCTTGCCGAAGCGTCCAAACATCGCGACTCCTTTGCTG  >  NC_002947/5804929‑5805224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.