New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4957290 =	75 (1.250)	4 (0.070)	4/258	NT	5.2%	coding (228/792 nt)	fliH	flagellar assembly protein FliH
	?	NC_002947	4957335 =	72 (1.230)					coding (183/792 nt)	fliH	flagellar assembly protein FliH

ATCAGCCGCTCGAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCGGGCACGGA  >  NC_002947/4957189‑4957483                                                                                                                                                    |                                                                                                                                                        aTCAGCCGCTCGAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAg                                                                                                                                                       >  3:33110/1‑149 (MQ=255)  tCAGCCGCTCGAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAgg                                                                                                                                                      <  4:33110/149‑1 (MQ=255)   cgacccggaaccggagcccgaaccggagcctgagcctgagcccgaggtcatcgaggaagtcgaggaagtgccgctggaagaagtccagccgttgaccctgGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAg                                                                                                                                                       >  1:317753‑M1/101‑148 (MQ=255)    aGCCGCTCGAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCTAGCTCTTCCAggg                                                                                                                                                     <  8:26136/148‑1 (MQ=255)      ccGCGCGAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCa                                                                                                                                                  <  4:285591/149‑1 (MQ=255)        gCTCGAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAAc                                                                                                                                                <  2:130113/149‑1 (MQ=255)        cggaaccggagcccgaaccggagcctgagcctgagcccgaggtcatcgaggaagtcgaggaagtgccgctggaagaagtccagccgttgaccctgGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAgg                                                                                                                                                      >  4:230391‑M1/96‑144 (MQ=255)        cggaaccggagcccgaaccggagcctgagcctgagcccgaggtcatcgaggaagtcgaggaagtgccgctggaagaagtccagccgttgaccctgGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAgg                                                                                                                                                      <  3:230391‑M1/49‑1 (MQ=255)            gAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACgg                                                                                                                                              >  8:9101/1‑147 (MQ=255)            gAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACgg                                                                                                                                              <  7:9101/147‑1 (MQ=255)             aGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTg                                                                                                                                           <  5:199122/149‑1 (MQ=255)               gCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGa                                                                                                                                         >  4:214955/1‑149 (MQ=255)                cTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGAc                                                                                                                                        <  2:191748/149‑1 (MQ=255)                cTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGAc                                                                                                                                        >  2:77340/1‑149 (MQ=255)                 tGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACgg                                                                                                                                              >  4:24884/1‑142 (MQ=255)                 tGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACgg                                                                                                                                              <  3:24884/142‑1 (MQ=255)                      aGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACttcttc                                                                                                                                  <  6:130933/149‑1 (MQ=255)                       gTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACttcttc                                                                                                                                  >  8:135201/1‑148 (MQ=255)                        tttGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGGTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACttcttc                                                                                                                                  >  1:259139/1‑147 (MQ=255)                            gTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCgg                                                                                                                          >  5:187609/1‑149 (MQ=255)                                  aGGGCCTCTTCGGCCTCCTGGCGAACCTTGGAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCactt                                                                                                                     >  1:28120/1‑149 (MQ=255)                                  aGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCacttc                                                                                                                    >  2:177860/1‑149 (MQ=255)                                    ggCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCacttcct                                                                                                                  >  8:83190/1‑149 (MQ=255)                                     gCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCacttcctc                                                                                                                 <  3:219316/149‑1 (MQ=255)                                     gCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCacttcctc                                                                                                                 <  2:28120/149‑1 (MQ=255)                                     gCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTAGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCacttcctc                                                                                                                 <  2:35139/149‑1 (MQ=255)                                          ttCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCacttcctcgactt                                                                                                            >  1:369803/1‑149 (MQ=255)                                              gCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCacttcctcgac                                                                                                              <  3:131768/143‑1 (MQ=255)                                              gCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCacttcctcgac                                                                                                              >  4:131768/1‑143 (MQ=255)                                                   ctGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGAt                                                                                                     <  2:369803/147‑1 (MQ=255)                                                   ctGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGa                                                                                                   >  3:152918/1‑149 (MQ=255)                                                   ctGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGa                                                                                                   >  3:261266/1‑149 (MQ=255)                                                        gAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCg                                                                                              >  1:299547/1‑149 (MQ=255)                                                         aaCCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCgg                                                                                             <  3:214955/149‑1 (MQ=255)                                                            cTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑AAGCGGCACTTCCTCGACTTCCTCGATGACCTCGggct                                                                                          >  6:145580/1‑149 (MQ=255)                                                                gAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGggctcag                                                                                       >  1:26720/1‑149 (MQ=255)                                                                gAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGggctca                                                                                        <  7:83190/148‑1 (MQ=255)                                                                gAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGggctca                                                                                        <  4:152918/148‑1 (MQ=255)                                                                  gCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGggctcaggc                                                                                     <  1:177860/149‑1 (MQ=255)                                                                       gTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGctcaggctcagg                                                                                <  6:38240/149‑1 (MQ=255)                                                                          cTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTcaggctcaggct                                                                              <  2:259139/148‑1 (MQ=255)                                                                           tgtgGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTcc                                                                            >  1:145162/1‑149 (MQ=255)                                                                             tgGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCgg                                                                          >  7:261426/1‑149 (MQ=255)                                                                              ggAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTCCACAGTAAAACTTCCTCGACTTCCTCGATGACCTCGGGCTCaggctcaggctcag                                                                           >  1:307920/1‑147 (MQ=255)                                                                               gAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGtt                                                                        >  7:185166/1‑149 (MQ=255)                                                                                 aGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCg                                                                      <  1:152607/149‑1 (MQ=255)                                                                                 aGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCg                                                                      >  6:326403/1‑149 (MQ=255)                                                                                 aGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGACTCAGGCTCCGGTTCg                                                                      <  2:145162/149‑1 (MQ=255)                                                                                 aGCCCGCGCGCTCACCGGTGTCGAATCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCg                                                                      <  2:98698/149‑1 (MQ=255)                                                                                    ccTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTACGGTTCGGGc                                                                   >  5:96797/1‑149 (MQ=255)                                                                                    ccTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGACCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCGCGGGCTCAGGCTCAGGCTCCGGTTCggg                                                                    >  8:175996/1‑148 (MQ=255)                                                                                     cTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCt                                                                  >  4:159577/1‑149 (MQ=255)                                                                                     cTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCt                                                                  >  3:323079/1‑149 (MQ=255)                                                                                        gcgcTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTcc                                                                <  4:261266/148‑1 (MQ=255)                                                                                         cgcTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACTGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCg‑g                                                             <  6:182656/149‑1 (MQ=255)                                                                                         cgcTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCg‑g                                                             >  5:142120/1‑149 (MQ=255)                                                                                          gcTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑Gt                                                            <  4:323079/149‑1 (MQ=255)                                                                                                   cctggaagagctcgaagccatccgtcaggaggcttacaacgagggcttcCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCg                                                        <  3:230391‑M2/95‑1 (MQ=255)                                                                                                   cctggaagagctcgaagccatccgtcaggaggcttacaacgagggcttcCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCg                                                        >  4:230391‑M2/50‑144 (MQ=255)                                                                                                    ctggaagagctcgaagccatccgtcaggaggcttacaacgagggcttcCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCg                                                   >  1:317753‑M2/49‑148 (MQ=255)                                                                                                     gCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCg                                                   >  3:324516/1‑147 (MQ=255)                                                                                                        AAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCt                                              <  7:227093‑M1/149‑1 (MQ=255)                                                                                                          GCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTg                                            >  5:145580‑M1/1‑149 (MQ=255)                                                                                                            ccTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGAGTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTgg                                           >  5:384821/1‑148 (MQ=255)                                                                                                             cTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGaa                                                 <  6:152221/141‑1 (MQ=255)                                                                                                             cTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGaa                                                 >  5:152221/1‑141 (MQ=255)                                                                                                             cTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTgg                                           >  7:50724/1‑147 (MQ=255)                                                                                                             cTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCa                                         <  8:14008/149‑1 (MQ=255)                                                                                                                gTTGTAAGCCTCCTGACGGAGGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGc                                       <  8:261426/148‑1 (MQ=255)                                                                                                                     aaGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCca                                  >  3:160950/1‑148 (MQ=255)                                                                                                                      aGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCcac                                 <  4:324516/148‑1 (MQ=255)                                                                                                                        cctcctGACGGATGGCTTCGAGCTCTTCCAGGGGCTTCGGCTGGACTTCTTC‑‑GAGCGGCACTTCCTCGTCTTCCTATATGACGTCGGGCTCTGGCTCATGCTCCGTTTCGTGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCcacat                               <  4:160950/148‑2 (MQ=255)                                                                                                                          tcctGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTg                                            <  7:283974/133‑1 (MQ=255)                                                                                                                          tcctGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATc                            >  1:195253/1‑149 (MQ=255)                                                                                                                            ctGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCa                          >  6:330841/1‑149 (MQ=255)                                                                                                                             tGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGCCCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATcccc                         >  4:191834/1‑147 (MQ=255)                                                                                                                              gACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCCCg                        >  6:326864/1‑149 (MQ=255)                                                                                                                                 ggATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGGTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGccc                     >  5:313655/1‑149 (MQ=255)                                                                                                                                      gCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCGCGTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCg                  <  1:77340/148‑1 (MQ=255)                                                                                                                                      gCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAg                <  6:313655/149‑1 (MQ=255)                                                                                                                                      acaacgagggcttcCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGa                 <  2:317753‑M2/134‑1 (MQ=255)                                                                                                                                        ttCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGt              >  6:58090/1‑149 (MQ=255)                                                                                                                                        ttCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGt              >  4:363120/1‑149 (MQ=255)                                                                                                                                          cGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTc             <  8:227093/148‑1 (MQ=255)                                                                                                                                           gAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTcgc           >  6:369373/1‑149 (MQ=255)                                                                                                                                             gCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCgg         >  6:290228/1‑149 (MQ=255)                                                                                                                                             gCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCgg         <  8:235084/149‑1 (MQ=255)                                                                                                                                                 ttcCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACGCATCCACGCCCTCGAGGTCGCGGGCAc     >  6:25253‑M2/4‑149 (MQ=255)                                                                                                                                                   cCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCGGGCa      <  5:369373‑M2/145‑1 (MQ=255)                                                                                                                                                   cCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCGGGCACg    >  7:251669‑M2/2‑148 (MQ=255)                                                                                                                                                    cAGGGTCACCGGCTGGACTTCTTC‑‑CAGCGGCACTTCCACGACTTCCTCGATCACCTCGGGCTCAGGCTCAGGCTCCGCTTCGGGCTCCG‑CTTCCGGGTACAAGCTTGGCAGCGTCAACACATCCACGACATCGAGGTAGCCGGCACGGa  >  8:139258/1‑149 (MQ=255)                                                                                                                                                    cAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGCCCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCGGGCACGGa  >  5:98666/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                        ATCAGCCGCTCGAGGCTGTCGAGTTTGGTTTTCAGGGCCTCTTCGGCCTCCTGGCGAACCTT‑GAGCTGGGTGCTGTGGAAGCCCTCGCGCTCACCGGTTGCGAAGCCCTCGTTGTAAGCCTCCTGACGGATGGCTTCGAGCTCTTCCAGGGTCAACGGCTGGACTTCTTC‑‑CAGCGGCACTTCCTCGACTTCCTCGATGACCTCGGGCTCAGGCTCAGGCTCCGGTTCGGGCTCCG‑GTTCCGGGTCGAAGCTTGGCAGCGTCCACACATCCACGCCCTCGAGGTCGCGGGCACGGA  >  NC_002947/4957189‑4957483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.