New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 229096	73 (1.210)	6 (0.110)	4/248	NT	7.3%	coding (1922/2088 nt)	PP_0176	putative efflux transporter
	?	NC_002947	= 229123	83 (1.470)					coding (1949/2088 nt)	PP_0176	putative efflux transporter

CGACCTGCTGGCGTACATGCCGCGCGCCGGCCAGCAGGCTCGCGAGCGCCTGAACACTGTGGTCGAGGAAGTCGGTGCGCACTACGCCGCCTGCCTGCGTGCTGGCGAACGCCTGCATGCCCCGGCCGCACTGCTGCGCAACATGGAACGCGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/228941‑229096 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgctcgTACAGCTCATCCAGGTTCAGCGCCAGGCGAGCGCGTTCCATGTTGCGCAGCAGTGCGGCCGGGGCATGCAGGCGTTCGCCAGCACGCAGGCAGGCGGCGTAGTGCGCACCGACTTCCTCGACCACAGTGTTCAGGCGCTCGCGAGCC  <  NC_002947/229123‑228977                                                                                                                                                                                                                                                                                                                 CGACCTGCTGGCGTACATGCCGCGCGCCGGCCAGCAGGCTCGCGAGCGCCTGAACACTGTGGTCGAGGAAGTCGGTGCGCACTACGCCGCCTGCCTACGTGCTGGCGAACGCCTGCATGCCCCGGCCGCACTGCTGCGCAACATGGAAC                                                                                                                                                            >  2:16433/1‑149    CCTGCTGGCGTACATGCCGCGCGCCGGCCAGCAGGCTCGCGAGCGCCTGAACACTGTGGTCGAGGAAGTCGGTGCGCACTACGCCGCCTGCCTGCGTGCTGGCGAACGCCTGCATGCCCCGGCCGCACTGCTGCGCAACATGGAACGCG                                                                                                                                                         <  5:235337/149‑1      TGCTGGCGTACATGCCGCGCACCGGCCAGCAGGCTCGCGAGCGCCTGAACACTGTGGTCGAGGAAGTCGGTGCGCACTACGCCGCCTGCCTGCGTGCTGGCGAGCGCCTGCATGCCCCGGCCGCACTGCTGCGCAACATGGAACGCGCT                                                                                                                                                       >  7:164690/1‑149        CTGGCGTACATGCCGCGCGCCGGCCAGCAGGCTCGCGAGCGCCTGAACACTGTGGTCGAGGAAGTCGGTGCGCACTACGCCGCCTGCCTGCGTGCTGGCGAACGCCTGCATGCCCCGGCCGCACTGCTGCGCAACATGGAACGCGCTC                                                                                                                                                      <  2:313181/148‑1                                             AGCGCCTGAACACTGTGGTCGAGGAAGTCGGTGCGCACTACGCCGCCTGCCTGCGTGCTGGCGAACGCCTGCATGCCCCGGCCGCACTGCTGCGCAACATGGAACGCGCTCGTACAGCTCATCCAGGTTCAGCGCCAGGCGAGCGCGTT                                                                                                                <  4:203595/149‑1                                                GCCTGAACACTGTGGTCGAGGAAGTCGGTGCGCACTACGCCGCCTGCCTGCGTGCTGGCGAACGCCTGCATGCCCCGGCCGCACTGCTGCGCAACATGGAACGCGCTCGTACAGCTCATCCAGGTTCAGCGCCAGGCGAGCGCGT                                                                                                                 >  3:243000/1‑145                                                GCCTGAACACTGTGGTCGAGGAAGTCGGTGCGCACTACGCCGCCTGCCTGCGTGCTGGCGAACGCCTGCATGCCCCGGCCGCACTGCTGCGCAACATGGAACGCGCTCGTACAGCTCATCCAGGTTCAGCGCCAGGCGAGCGCGT                                                                                                                 <  4:243000/145‑1                                                GCCTGAACACTGTGGTCGAGGAAGTCGGTGCGCACTACGCCGCCTGCCTGCGTGCTGGCGAACGCCTGCATGCCCCGGCCGCACTGCTGCGCAACATGGAACGCGCTCGTACAGCTCATCCAGGTTCAGCGCCAGGCGAGCGCGT                                                                                                                 >  7:344581/1‑145                                                GCCTGAACACTGTGGTCGAGGAAGTCGGTGCGCACTACGCCGCCTGCCTGCGTGCTGGCGAACGCCTGCATGCCCCGGCCGCACTGCTGCGCAACATGGAACGCGCTCGTACAGCTCATCCAGGTTCAGCGCCAGGCGAGCGCGT                                                                                                                 <  8:344581/145‑1                                                GCCTGAACACTCTGGGCGAGGAAGGCGGAGCGCACGACACCGCCTGCCTGCGTGCAGGCGAACGCCTGCAAGCCCCGGCCGCACTGCTGCGCAACATGGAACGCGCTCGTACAGCTCATCCAGGTTCACCGCCAGGCGAGCGCGTTCCA                                                                                                             <  8:142163/149‑1                                                                                                                                                            GTACAGCTCATCCAGGTTCAGCGCCAGGCGAGCGCGTTCCATGTTGCGCAGCAGTGCGGCCGGGGCATGCAGGCGTTCGCCAGCACGCAGGCAGGCGGCGTAGTGCGCACCGACTTCCTCGACCACAGTGTTCAGGCGCTCGCGAGCC  <  2:222859/148‑1                                                                                                                                                            GTACAGCTCATCCAGGTTCAGCGCCAGGCGAGCGCGTTCCATGTTGCGCAGCAGTGCGGCCGGGGCATGCAGGCGTTCGCCAGCACGCAGGCAGGCGGCGTAGTGCGCACCGACTTCCTCGACCACAGTGTTCAGGCGCTCGCGAGC   <  8:196278/147‑1                                                                                                                                                            GTACAGCTCATCCAGGTTCAGCGCCAGGCGAGCGCGTTCCATGTTGCGCAGCAGTGCGGCCGGGGCATGCAGGCGTTCGCCAGCACGCAGGCAGGCGGCGTAGTGCGCACCGACTTCCTCGACCACAGT                     <  5:27001/129‑1                                                                                                                                                            GTACAGCTCATCCAGGTTCAGCGCCAGGCGAGCGCGTTCCATGTTGCGCAGCAGTGCGGCCGGGGCATGCAGGCGTTCGCCAGCACGCAGGCAGGCGGCGTAGTGCGCACCGACTTCCTCGACCACAGT                     >  6:27001/1‑129                                                                                                                                                                                                                                                                                                                 CGACCTGCTGGCGTACATGCCGCGCGCCGGCCAGCAGGCTCGCGAGCGCCTGAACACTGTGGTCGAGGAAGTCGGTGCGCACTACGCCGCCTGCCTGCGTGCTGGCGAACGCCTGCATGCCCCGGCCGCACTGCTGCGCAACATGGAACGCGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/228941‑229096 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgctcgTACAGCTCATCCAGGTTCAGCGCCAGGCGAGCGCGTTCCATGTTGCGCAGCAGTGCGGCCGGGGCATGCAGGCGTTCGCCAGCACGCAGGCAGGCGGCGTAGTGCGCACCGACTTCCTCGACCACAGTGTTCAGGCGCTCGCGAGCC  <  NC_002947/229123‑228977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.