| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 423457 = | 79 (1.310) | 7 (0.120) | 3/254 | NT | 9.5% | coding (491/2787 nt) | PP_0348 | hypothetical protein |
| ? | NC_002947 | 423514 = | 57 (0.980) | coding (434/2787 nt) | PP_0348 | hypothetical protein | |||||
CCGCGTTCTGCTGGAAGGCCTACGGCCCAACTGGCGAAGCTACCTGCCAGGCACACTGATCATCGTTGCCGGTACCGCCGAAGGCCCTATGCTCACGCCTCAGGATGCCGCAGGCGCTGCCTTGCTGTGCAGCCTGTCACAAGGCATC‑‑GAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/423609‑423457‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggcGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTG > NC_002947/423514‑423661 CCGCGTTCTGCTGGAAGGCCTACGGCCCAACTGGCGAAGCTACCTGCCAGGCACACTGATCATCGTTGCCGGTACCGCCGAAGGCCCTATGCTCACGCCTCAGGATGCCGCAGGCGCTGCCTTGCTGTGCAGCCTGTCACAAGGCATC‑‑G < 7:47224/149‑1 GCGTTCTGCTGGAAGGCCTACGGCCCAACTGGCGAAGCTACCTGCCAGGCACACTGATCATCGTTGCCGGTACCGCCGAAGGCCCTATGCTCACGCCTCAGGATGCCGCAGGCGCTGCCTTGCTGTGCAGCCTGTCACAAGGCATC‑‑GAG < 3:58149/149‑1 TCACGCCTCAGGATGCCGCAGGCGCTGCCTTGCTGTGCAGCCTGTCACAAGGCATC‑‑GAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAG > 8:180539/1‑147 CCTCAGGATGCCGCAGGCGCTGCCTTGCTGTGCAGCCTGTCACAAGGCATC‑‑GAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACG > 6:134921/1‑149 GGATGCCGCAGGCGCTGCCTTGCTGTGCAGCCTGTCACAAGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGG < 5:288537/131‑1 GGATGCCGCAGGCGCTGCCTTGCTGTGCAGCCTGTCACAAGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGG > 6:288537/1‑131 GGATGCCGCAGGCGCTGCCTTGCTGTGCAGCCTGTCACAAGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGC > 3:31253/1‑111 GGATGCCGCAGGCGCTGCCTTGCTGTGCAGCCTGTCACAAGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGC < 4:31253/111‑1 CCGCAGGCGCTGCCTTGCTGTGCAGCCTGTCACAAGGCATC‑‑GAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCT < 7:180539/149‑1 CATC‑‑GAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGA < 5:134921/149‑1 AGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAATGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGG < 4:168949/147‑1 CGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTG < 3:365023/149‑1 CCGCGTTCTGCTGGAAGGCCTACGGCCCAACTGGCGAAGCTACCTGCCAGGCACACTGATCATCGTTGCCGGTACCGCCGAAGGCCCTATGCTCACGCCTCAGGATGCCGCAGGCGCTGCCTTGCTGTGCAGCCTGTCACAAGGCATC‑‑GAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/423609‑423457‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaggcGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTG > NC_002947/423514‑423661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |