New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 423457 =79 (1.310)7 (0.120) 3/254 NT 9.5% coding (491/2787 nt) PP_0348 hypothetical protein
?NC_002947 423514 = 57 (0.980)coding (434/2787 nt) PP_0348 hypothetical protein

TCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGG  >  NC_002947/423367‑423662
                                                                                                                                                   |                                                                                                                                                    
tCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCg                                                                                                                                                      <  5:55385/148‑1 (MQ=255)
  aGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTg                                                                                                                                                    <  4:10295/148‑1 (MQ=255)
  aGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTACACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGa                                                                                                                                                   <  5:130430/149‑1 (MQ=255)
    ctggaaggcctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccctatgctcacGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGa                                                                                                                                                   >  8:180539‑M1/87‑147 (MQ=255)
      tACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCACAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCCGCATCCTTCCGCGTGAgaa                                                                                                                                                >  6:25813/1‑146 (MQ=255)
         aGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAgg                                                                                                                                            >  2:62304/1‑149 (MQ=255)
           aTGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCGAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGc                                                                                                                                          <  7:227422/149‑1 (MQ=255)
           aTGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGc                                                                                                                                          >  2:126652/1‑149 (MQ=255)
           aTGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGc                                                                                                                                          >  3:177275/1‑149 (MQ=255)
             gcagcaGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCATTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCt                                                                                                                                        >  1:253283/1‑149 (MQ=255)
               agcagcGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTc                                                                                                                                      >  6:11496/1‑149 (MQ=255)
                gcagcGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGACCTTcg                                                                                                                                     >  3:179121/1‑149 (MQ=255)
                      gTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTa                                                                                                                               >  5:326132/1‑149 (MQ=255)
                       tCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTAc                                                                                                                              <  8:52054/149‑1 (MQ=255)
                            tctGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGc                                                                                                                          >  3:168949/1‑148 (MQ=255)
                            tctGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGc                                                                                                                          >  3:84463/1‑148 (MQ=255)
                              tGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAAc                                                                                                                       >  2:22370/1‑149 (MQ=255)
                                gAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACga                                                                                                                     >  2:240361/1‑149 (MQ=255)
                                  gTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACgat                                                                                                                    >  4:285741/1‑148 (MQ=255)
                                     ggTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACgatgat                                                                                                                 >  3:143306/1‑148 (MQ=255)
                                      gTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACgatgat                                                                                                                 >  8:315720/1‑147 (MQ=255)
                                            cAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGc                                                                                                         <  4:273011/149‑1 (MQ=255)
                                             aGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGcc                                                                                                        <  1:62304/149‑1 (MQ=255)
                                              ggCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCt                                                                                                       <  6:251489/149‑1 (MQ=255)
                                              ggCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCt                                                                                                       <  5:11496/149‑1 (MQ=255)
                                                     gCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGa                                                                                                                                                   >  7:62514/1‑98 (MQ=255)
                                                     gCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGa                                                                                                                                                   <  8:62514/98‑1 (MQ=255)
                                                     gCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAgg                                                                                                 <  4:177275/148‑1 (MQ=255)
                                                     gCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAgg                                                                                                 <  5:154932/148‑1 (MQ=255)
                                                       aaaGCTCCTGGTGCAGTGCGCCCAGGGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCAGCCTGAGGCGTGAGCATAGGGCGTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAg                                                                                              >  6:360847/1‑149 (MQ=255)
                                                          gCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCtt                                                                                           >  6:86783/1‑149 (MQ=255)
                                                          gCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCtt                                                                                           <  6:203664/149‑1 (MQ=255)
                                                              cTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGcc                                                                                       <  4:143306/149‑1 (MQ=255)
                                                               tGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGc                                                                                        >  7:65067/1‑147 (MQ=255)
                                                                  tGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGtt                                                                                   <  1:240361/149‑1 (MQ=255)
                                                                      gTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGc                                                                               >  6:364845/1‑149 (MQ=255)
                                                                      gTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGc                                                                               <  2:253283/149‑1 (MQ=255)
                                                                       tGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTc                                                                                          <  7:132083/137‑1 (MQ=255)
                                                                       tGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTc                                                                                          >  8:132083/1‑137 (MQ=255)
                                                                       tGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGcc                                                                              <  5:86783/149‑1 (MQ=255)
                                                                          gcCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCg                                                                             >  6:215161/1‑147 (MQ=255)
                                                                          gcCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTa                                                                           <  6:350478/149‑1 (MQ=255)
                                                                            ccAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAgg                                                                         >  8:240379/1‑149 (MQ=255)
                                                                            ccAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAgg                                                                         >  3:78718/1‑149 (MQ=255)
                                                                            ccAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAgg                                                                         >  6:139922/1‑149 (MQ=255)
                                                                                  aGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCTTAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTc                                                                    >  7:306475/1‑148 (MQ=255)
                                                                                   gTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTc                                                                    >  5:360013/1‑147 (MQ=255)
                                                                                    tCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTa                                                                           <  7:94306/139‑1 (MQ=255)
                                                                                    tCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTa                                                                           >  8:94306/1‑139 (MQ=255)
                                                                                      tcacgcctcaggatgccgcaggcgctgccttgctgtgcagcctgtcacaaggcatcgaggcGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCcag                                                                 >  8:180539‑M2/62‑147 (MQ=255)
                                                                                      gAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCcag                                                                 >  2:115520/1‑147 (MQ=255)
                                                                                      gAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCcag                                                                 >  3:92961/1‑147 (MQ=255)
                                                                                        aaGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCTTAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGa                                                             <  8:306475/149‑1 (MQ=255)
                                                                                        aaGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCcagcag                                                              >  7:86661/1‑148 (MQ=255)
                                                                                           cctcaggatgccgcaggcgctgccttgctgtgcagcctgtcacaaggcatcgaggcGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAAcg                                                          >  6:134921‑M2/57‑149 (MQ=255)
                                                                                            CTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAAcgc                                                         <  3:58149‑M1/149‑1 (MQ=255)
                                                                                              ggatgccgcaggcgctgccttgctgtgcagcctgtcacaaggcatcctgaggcGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGc                                                                                             <  4:31253‑M2/58‑1 (MQ=255)
                                                                                              ggatgccgcaggcgctgccttgctgtgcagcctgtcacaaggcatcctgaggcGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGc                                                                                             >  3:31253‑M2/54‑111 (MQ=255)
                                                                                              ggatgccgcaggcgctgccttgctgtgcagcctgtcacaaggcatcctgaggcGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAgg                                                                         >  6:288537‑M2/54‑131 (MQ=255)
                                                                                              ggatgccgcaggcgctgccttgctgtgcagcctgtcacaaggcatcctgaggcGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAgg                                                                         <  5:288537‑M2/78‑1 (MQ=255)
                                                                                              CGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCgg                                                       <  7:47224‑M1/149‑1 (MQ=255)
                                                                                               gATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAAcgcg                                                        <  5:215161/147‑1 (MQ=255)
                                                                                                  gCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGa                                                   >  4:57820/1‑149 (MQ=255)
                                                                                                   ccTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGAc                                                  <  1:126652/149‑1 (MQ=255)
                                                                                                     ccgcaggcgctgccttgctgtgcagcctgtcacaaggcatcgaggcGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCt                                                <  7:180539‑M2/103‑1 (MQ=255)
                                                                                                                  cacaGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGACCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTg                                     <  4:179121/147‑1 (MQ=255)
                                                                                                                     aGCATGGCAGCGCCTGCGGCATCCTGTGGCGTGAGCATAGGGCCTTCGGCGGTACGGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCGAGTTGGGCCGTAGGCCTTCCAGCAGATCGCGGTAGACCTGTGGCCTTTTGGCCAg                                <  5:25813/149‑1 (MQ=255)
                                                                                                                     aGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAg                                <  4:92961/149‑1 (MQ=255)
                                                                                                                      gCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAgg                               <  5:364845/149‑1 (MQ=255)
                                                                                                                             aGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCatat                        >  4:365023/1‑149 (MQ=255)
                                                                                                                                 ccTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCt                    >  5:77794/1‑149 (MQ=255)
                                                                                                                                       gCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTg              >  1:837/1‑149 (MQ=255)
                                                                                                                                       gCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTg              <  1:22370/149‑1 (MQ=255)
                                                                                                                                          tCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGa           <  6:326132/149‑1 (MQ=255)
                                                                                                                                          catcgaggcGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGa           <  5:134921‑M2/140‑1 (MQ=255)
                                                                                                                                           ccTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAg          >  5:138703/1‑149 (MQ=255)
                                                                                                                                               aggcGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAATGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAggg        <  4:168949‑M2/143‑1 (MQ=255)
                                                                                                                                                  cGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTg   <  3:365023‑M2/148‑1 (MQ=255)
                                                                                                                                                   gTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTgg  >  7:196293/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTCGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGAACGCGGTAGACCTGTGGCCTTTTGGCCAGGGGCATATGCCTGCGCTGGGAGGGTAGTGG  >  NC_002947/423367‑423662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.