New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	423457 =	79 (1.310)	7 (0.120)	3/254	NT	9.5%	coding (491/2787 nt)	PP_0348	hypothetical protein
	?	NC_002947	423514 =	57 (0.980)					coding (434/2787 nt)	PP_0348	hypothetical protein

ATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGA  >  NC_002947/423309‑423603                                                                                                                                                     |                                                                                                                                                     cactaccctcccagcgcaggcatatgcccctggccaaaaggccacaggtctaccgcgttctgctggaaggcctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccctatgctcacg                                                                                                                                                      <  3:365023‑M1/1‑1 (MQ=255)   cGGCGTACCAGTCATAGCGCAGCCGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGcc                                                                                                                                                    >  4:205010/1‑149 (MQ=255)    ggCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCTGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCt                                                                                                                                                   <  1:1525/149‑1 (MQ=255)    ggCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCt                                                                                                                                                   <  1:15699/149‑1 (MQ=255)      ccctcccagcgcaggcatatgcccctggccaaaaggccacaggtctaccgcattctgctggaaggcctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccctatgctcacGCCt                                                                                                                                                   <  4:168949‑M1/4‑1 (MQ=255)         tcccagcgcaggcatatgcccctggccaaaaggccacaggtctaccgcgttctgctggaaggcctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccctatgctcacGCCTC‑‑GATg                                                                                                                                            <  5:134921‑M1/9‑1 (MQ=255)             gTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCtt                                                                                                                                        >  6:86106/1‑149 (MQ=255)             gTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCtt                                                                                                                                        <  2:242192/149‑1 (MQ=255)              tCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCTTC‑‑GATGCCTtg                                                                                                                                       <  3:36123/149‑1 (MQ=255)              tCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GAt                                                                                                                                             <  8:14708/143‑1 (MQ=255)              tCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GAt                                                                                                                                             >  7:14708/1‑143 (MQ=255)              tCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTtg                                                                                                                                       <  6:145990/149‑1 (MQ=255)              tCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTtg                                                                                                                                       >  3:295936/1‑149 (MQ=255)              tCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTtg                                                                                                                                       >  3:273011/1‑149 (MQ=255)                 tAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGa                                                                                                                                    >  5:114976/1‑149 (MQ=255)                   gcgcAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACa                                                                                                                                  <  5:294238/149‑1 (MQ=255)                     gcAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAgg                                                                                                                                >  6:154932/1‑149 (MQ=255)                        gACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTg                                                                                                                             <  4:295936/149‑1 (MQ=255)                          cGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGca                                                                                                                           <  3:208626/149‑1 (MQ=255)                           gCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGcac                                                                                                                          <  3:205010/149‑1 (MQ=255)                            cTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGca                                                                                                                           >  6:180861/1‑147 (MQ=255)                                   cGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGc                                                                                                                  <  5:180861/149‑1 (MQ=255)                                    ggCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCa                                                                                                                 <  1:173846/149‑1 (MQ=255)                                      cGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAgc                                                                                                               <  5:86106/149‑1 (MQ=255)                                           gcgGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTg                                                                                                          <  6:99434/149‑1 (MQ=255)                                              aggtctaccgcgttctgctggaaggcctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccctatgctcacGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCgg                                                                                                       <  7:180539‑M1/46‑1 (MQ=255)                                               tCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTtgt                                                                                                                                      <  1:133218/117‑1 (MQ=255)                                               tCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTtgt                                                                                                                                      >  2:133218/1‑117 (MQ=255)                                               tCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCgg                                                                                                       >  3:10295/1‑148 (MQ=255)                                                   ccTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTACACAGCAAGGCAGCGCCTGCGGCATcc                                                                                                  >  6:130430/1‑149 (MQ=255)                                                   ccTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCAAGTGAGTAGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATcc                                                                                                  >  5:350478/1‑149 (MQ=255)                                                    cTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCt                                                                                                 >  5:203664/1‑149 (MQ=255)                                                       cGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAg                                                                                              <  6:114976/149‑1 (MQ=255)                                                       cGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCCAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAg                                                                                              <  4:91014/149‑1 (MQ=255)                                                        cgttctgctggaaggcctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccctatgctcacGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAgg                                                                                             >  6:134921‑M1/94‑149 (MQ=255)                                                           tCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCg                                                                                           <  5:55385/148‑1 (MQ=255)                                                             aGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTg                                                                                         <  4:10295/148‑1 (MQ=255)                                                             aGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTACACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGa                                                                                        <  5:130430/149‑1 (MQ=255)                                                               ctggaaggcctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccctatgctcacGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGa                                                                                        >  8:180539‑M1/87‑147 (MQ=255)                                                                 tACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCACAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCCGCATCCTTCCGCGTGAgaa                                                                                     >  6:25813/1‑146 (MQ=255)                                                                  aCAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATTCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAg                                                                                              <  1:286925/138‑1 (MQ=255)                                                                  aCAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATACCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAg                                                                                              >  2:286925/1‑138 (MQ=255)                                                                    aGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAgg                                                                                 >  2:62304/1‑149 (MQ=255)                                                                      aTGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCGAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGc                                                                               <  7:227422/149‑1 (MQ=255)                                                                      aTGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGc                                                                               >  2:126652/1‑149 (MQ=255)                                                                      aTGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGc                                                                               >  3:177275/1‑149 (MQ=255)                                                                       cctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccctatgctcacGCCTCAGGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATcc                                                                                                  <  5:288537‑M1/53‑1 (MQ=255)                                                                       cctacggcccaactggcgaagctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccctatgctcacGCCTCAGGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATcc                                                                                                  >  6:288537‑M1/79‑131 (MQ=255)                                                                        gcagcaGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCATTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCt                                                                             >  1:253283/1‑149 (MQ=255)                                                                          agcagcGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTc                                                                           >  6:11496/1‑149 (MQ=255)                                                                           gcagcGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGACCTTcg                                                                          >  3:179121/1‑149 (MQ=255)                                                                                 gTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTa                                                                    >  5:326132/1‑149 (MQ=255)                                                                                  tCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTAc                                                                   <  8:52054/149‑1 (MQ=255)                                                                                       tctGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGc                                                               >  3:84463/1‑148 (MQ=255)                                                                                       tctGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGc                                                               >  3:168949/1‑148 (MQ=255)                                                                                        ctGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGc                                                                                            >  1:2655/1‑118 (MQ=255)                                                                                        ctGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGc                                                                                            <  2:2655/118‑1 (MQ=255)                                                                                         tGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAAc                                                            >  2:22370/1‑149 (MQ=255)                                                                                           gctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccctatgctcacGCCTCAGGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATcc                                                                                                  >  3:31253‑M1/59‑111 (MQ=255)                                                                                           gctacctgccaggcacactgatcatcgttgccggtaccgccgaaggccctatgctcacGCCTCAGGATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATcc                                                                                                  <  4:31253‑M1/53‑1 (MQ=255)                                                                                           gAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACga                                                          >  2:240361/1‑149 (MQ=255)                                                                                             gTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACgat                                                         >  4:285741/1‑148 (MQ=255)                                                                                                ggTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACgatgat                                                      >  3:143306/1‑148 (MQ=255)                                                                                                 gTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACgatgat                                                      >  8:315720/1‑147 (MQ=255)                                                                                                       cAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGc                                              <  4:273011/149‑1 (MQ=255)                                                                                                        aGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGcc                                             <  1:62304/149‑1 (MQ=255)                                                                                                         ggCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCt                                            <  5:11496/149‑1 (MQ=255)                                                                                                         ggCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCt                                            <  6:251489/149‑1 (MQ=255)                                                                                                                gCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGa                                                                                        >  7:62514/1‑98 (MQ=255)                                                                                                                gCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGa                                                                                        <  8:62514/98‑1 (MQ=255)                                                                                                                gCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAgg                                      <  5:154932/148‑1 (MQ=255)                                                                                                                gCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAgg                                      <  4:177275/148‑1 (MQ=255)                                                                                                                  aaaGCTCCTGGTGCAGTGCGCCCAGGGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCAGCCTGAGGCGTGAGCATAGGGCGTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAg                                   >  6:360847/1‑149 (MQ=255)                                                                                                                     gCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCtt                                <  6:203664/149‑1 (MQ=255)                                                                                                                     gCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCtt                                >  6:86783/1‑149 (MQ=255)                                                                                                                         cTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGcc                            <  4:143306/149‑1 (MQ=255)                                                                                                                          tGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGc                             >  7:65067/1‑147 (MQ=255)                                                                                                                             tGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGtt                        <  1:240361/149‑1 (MQ=255)                                                                                                                                 gTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGc                    >  6:364845/1‑149 (MQ=255)                                                                                                                                 gTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGc                    <  2:253283/149‑1 (MQ=255)                                                                                                                                  tGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTc                               <  7:132083/137‑1 (MQ=255)                                                                                                                                  tGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTc                               >  8:132083/1‑137 (MQ=255)                                                                                                                                  tGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGcc                   <  5:86783/149‑1 (MQ=255)                                                                                                                                     gcCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCg                  >  6:215161/1‑147 (MQ=255)                                                                                                                                     gcCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTa                <  6:350478/149‑1 (MQ=255)                                                                                                                                       ccAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAgg              >  3:78718/1‑149 (MQ=255)                                                                                                                                       ccAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAgg              >  8:240379/1‑149 (MQ=255)                                                                                                                                       ccAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAgg              >  6:139922/1‑149 (MQ=255)                                                                                                                                             aGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCTTAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTc         >  7:306475/1‑148 (MQ=255)                                                                                                                                              gTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTc         >  5:360013/1‑147 (MQ=255)                                                                                                                                               tCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTa                <  7:94306/139‑1 (MQ=255)                                                                                                                                               tCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTa                >  8:94306/1‑139 (MQ=255)                                                                                                                                                 gAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCcag      >  3:92961/1‑147 (MQ=255)                                                                                                                                                 gAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCcag      >  2:115520/1‑147 (MQ=255)                                                                                                                                                   aaGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCTTAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGa  <  8:306475/149‑1 (MQ=255)                                                                                                                                                   aaGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCcagcag   >  7:86661/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                     ATCGGCGTACCAGTCATAGCGCAGACGCTTTGACCGGCGAGCGCGGTCCGCCTGCGTGTCAGTGTACAGATGCAGCAGCGGTCTGCTCTGGAGTGGGTCTTCCAGGCGTTCGCAAAGCTCCTGGTGCAGTGCGCCCAGTGAGTCGAAAGCCTC‑‑GATGCCTTGTGACAGGCTGCACAGCAAGGCAGCGCCTGCGGCATCCTGAGGCGTGAGCATAGGGCCTTCGGCGGTACCGGCAACGATGATCAGTGTGCCTGGCAGGTAGCTTCGCCAGTTGGGCCGTAGGCCTTCCAGCAGA  >  NC_002947/423309‑423603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.