New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	478258 =	38 (0.630)	3 (0.050)	3/260	NT	7.7%	intergenic (+6/+104)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	478359 =	35 (0.590)					intergenic (+107/+3)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase

AAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCG‑TCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/478406‑478258 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCT  >  NC_002947/478359‑478443                                                                                                                                                                                                                                             AAAGGTGAACGGCTGAAACCGCTCGTCGCATACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCATAGTTTGGGCTCAGCCCGCTCGTCGGAGCGGGTTTACCCGCGAAGAGGCCGAT                                                                                        <  1:242263/149‑1                                                                        CCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCG‑TCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGATAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGAC                >  7:118624/1‑149                                                                          GCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCG‑TCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGATAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCG              >  3:341752/1‑149                                                                                      GGCACACATCAGAGGTTGGGCTCAGCCCG‑TCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGATAGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCT  <  4:341752/149‑1                                                                                                                                                                                                                                             AAAGGTGAACGGCTGAAAGCGCTCGAGGCTTACCAGCGCGGTTAGACCTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGCACACATCAGAGGTTGGGCTCAGCCCG‑TCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/478406‑478258 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taGGTCTAACCGCGCTGGTAAGCCTCGAGCGCTTTCAGCCGTTCACCTTTGAGTGCTTCGCCCAGTGCCTGACCGGTCAGCCCGGCT  >  NC_002947/478359‑478443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.