New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	594771 =	40 (0.660)	4 (0.070)	4/242	NT	8.0%	intergenic (‑10/+117)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease
	?	NC_002947	594856 =	55 (1.000)					intergenic (‑95/+32)	PP_0505/PP_0506	hypothetical protein/ABC transporter permease

CCGGCAATCGCTGGCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/594927‑594771 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaagCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGTCCATTCATGG  >  NC_002947/594856‑595002                                                                                                                                                                                                                                                                                                                  CCGGCAATCGCTGGCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATG                                                                                                                                                              <  2:91076/148‑1  CGGCAATCGCTGGCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCC                                                                                                                                                            >  7:277313/1‑149    GCAATCGCTGGCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCGTGTGCAGTTCCTGTGGGCGCCGGCATGCCCG                                                                                                                                                          >  1:271441/1‑149       ATCGCTGGCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACATGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCG                                                                                                                                                        >  7:266232/1‑148          GCTGGCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAG                                                                                                                                                     <  3:359920/148‑1              GCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCtcccaca                                                                                                                                                  <  7:287858/147‑8                                                                                         GCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCG                                                                     >  6:238652/1‑149                                                                                               ACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGC                                                               >  6:256473/1‑149                                                                                                  GGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGG                                                            <  5:256473/149‑1                                                                                                                CTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCA                                              <  5:238652/149‑1                                                                                                                                                        GCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCC                                <  1:189603/123‑1                                                                                                                                                        GCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCC                                >  2:189603/1‑123                                                                                                                                                        GCGAAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCACCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGTCCATT       >  2:326342/1‑148                                                                                                                                                           AAGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGTCCATTCATG   <  3:332374/149‑1                                                                                                                                                            AGCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGTCCATTCATGG  <  6:141554/149‑1                                                                                                                                                                                                                                                                                                                  CCGGCAATCGCTGGCTGACGGCCTGTCCATACACCTCTGAGTGCGCGTAATGATCAAACACCTCACCGCCTGCTTCGCGGGCACGCCCGCTCCCACAGGGAGCCCCGCAGGCTTTGGAGCTTGTGCAGTACCTGTGGGAGCGGGCATGCCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/594927‑594771 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaagCAGGCGGTGAGGTGTTTGATCATTACGCGCACTCAGAGGTGTATGGACAGGCCGTCAGCCAGCGATTGCCGGTAAGCCCGCCACGCCGGCACGCTGCCCATCAGCAACGCGGCCCCCAGGATGATAGCCAGCAAGGTCCATTCATGG  >  NC_002947/594856‑595002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.