New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 875905 = | 44 (0.730) | 4 (0.070) | 4/248 | NT | 8.6% | intergenic (‑14/+73) | PP_0760/PP_mr65 | membrane protein/YybP‑YkoY |
? | NC_002947 | 875949 = | 44 (0.780) | intergenic (‑58/+29) | PP_0760/PP_mr65 | membrane protein/YybP‑YkoY |
CCGGGGCGGGGAGGCTGTACGTGTCATAGCCGTGTCGACCCGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/875950‑875905 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgccccGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGG > NC_002947/875949‑876094 CCGGGGCGGGGAGGCTGTACGTGTCATAGCCGTGTCGACCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTG > 8:152116/1‑148 GGGGAGGCTGTACGTGTCATAGCCGTGTCGACCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGC < 1:203814/124‑1 GGGGAGGCTGTACGTGTCATAGCCGTGTCGACCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGC > 2:203814/1‑124 TACGTGTCATAGCCGTGTCGACCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGC < 7:152116/149‑1 CGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCG < 7:58744/149‑1 CCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGG < 1:261240/149‑1 CCGGGGCGGGGAGGCTGTACGTGTCATAGCCGTGTCGACCCGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/875950‑875905 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgccccGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGG > NC_002947/875949‑876094 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |