New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	875905 =	44 (0.730)	4 (0.070)	4/248	NT	8.6%	intergenic (‑14/+73)	PP_0760/PP_mr65	membrane protein/YybP‑YkoY
	?	NC_002947	875949 =	44 (0.780)					intergenic (‑58/+29)	PP_0760/PP_mr65	membrane protein/YybP‑YkoY

GGGCAGCGAGAATGAGTGCGAGCAGTTGCGTCTTGTCGCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGG  >  NC_002947/875801‑876094                                                                                                                                                     |                                                                                                                                                  gggCAGCGAGAATGAGTGCGAGCAGTTGCGTCTTGTCGCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTccccgccccg                                                                                                                                                   <  4:54575/149‑1 (MQ=255)  ggCAGCGAGAATGAGTGCGAGCAGTTGCGTCTTGTCGCCGATCACGGCCAGGGCAACGATAGCGGTGGCGACCAACAGTGATTCCAGCATCAGCATTAGTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCGCCCCGCACCgg                                                                                                                                                  >  6:216937/1‑149 (MQ=255)  ggCAGCGAGAATGAGTGCGAGCAGTTGAGTCTTGTCGCCGATATCGGCCAGGGCAACGAAAGCGGTGTGGACAAACAGTGATTCCAGCATCAGGATTCCTACGGGGTCGGGACGACACGGATATCACCAGAACAGCCTCCACGCCCCgg                                                                                                                                                  >  6:222175/1‑149 (MQ=255)   cacagaccatggcgcgtgcgacccaccatgcacgcctgcatggagagatccgcatagacggatcgagggtttgacaagacctatgacacgcacaccttacccGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCgg                                                                                                                                                  >  8:152116‑M1/103‑148 (MQ=255)    cAGCGAGAATGAGTGCGAGCAGTTGCGTCTTGTCGCCGATCTCTGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGt                                                                                                                                                <  3:21276/149‑1 (MQ=255)     aGCGAGAATGAGTGCGAGCAGTTGCGTCTTGTCGCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGt                                                                                                                                                >  8:197547/1‑148 (MQ=255)             tGAGTGCGAGCAGTTGCGTCTTGTCGCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGc                                                                                                                                       <  7:197547/149‑1 (MQ=255)               aGTGCGAGCAGTTGCGTCTTGTCGCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCgt                                                                                                                                     <  1:903/149‑1 (MQ=255)               aGTGCGAGCAGTTGCGTCTTGTCGCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCgt                                                                                                                                     <  2:218830/149‑1 (MQ=255)                                cTTGTCGCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGt                                                                                                                            <  1:171053/141‑1 (MQ=255)                                cTTGTCGCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGt                                                                                                                            >  2:171053/1‑141 (MQ=255)                                 ttGTCGCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCaaa                                                                                                                   >  1:2760/1‑149 (MQ=255)                                      gCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCgt                                                                                                                                     <  4:65125/126‑1 (MQ=255)                                      gCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCgt                                                                                                                                     >  3:65125/1‑126 (MQ=255)                                      gCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCaaa                                                                                                                   <  6:228283/144‑1 (MQ=255)                                      gCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCaaa                                                                                                                   >  5:228283/1‑144 (MQ=255)                                      gCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTc                                                                                                              >  2:119686/1‑149 (MQ=255)                                           tctcGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATcc                                                                                                         >  1:142844/1‑149 (MQ=255)                                               ggCCACGGCAACGCTAGCGGTGGGTACCAACCGTGATTCCCGCATCAGTCTTCCTAAGGGGGCGGGTCGACACGGCTATGACACCTACAGCCTCCCCGCCCCGGGTAACGGGTGCGTGTCATAGGTCTTGTCAAACCCTCGATcc                                                                                                         <  4:44229/145‑1 (MQ=255)                                                        aaCGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGAtc                                                                                            >  5:190988/1‑149 (MQ=255)                                                                          cAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGgtgt                                                                             <  6:235824/146‑1 (MQ=255)                                                                          cAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGc                                                                           <  3:232586/148‑1 (MQ=255)                                                                          cAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGc                                                                           >  4:232586/1‑148 (MQ=255)                                                                          cAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGAGt                                                                             >  5:235824/1‑146 (MQ=255)                                                                            aCAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCACGCCTGCAtg                                                                        >  7:41132/1‑149 (MQ=255)                                                                                tGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCACGCCTGCAtggaga                                                                    <  8:41132/149‑4 (MQ=255)                                                                                 gATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGTCACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCAtggtgg                                                                    <  5:216937/148‑1 (MQ=255)                                                                                 gATTCCAGCATCAGGATTACTAAGGGGGCGGGGCGACACGTCTATGACACGTACAGACTCCCCGCCCCGGGTAAGGGGGGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCAtggtgg                                                                    <  5:222175/148‑1 (MQ=255)                                                                                       aGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCGCTCCATGCAGGCGTGCATGGGGGGgcgccc                                                             >  8:236151/1‑147 (MQ=255)                                                                                       aGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGGCTATGCGGATCTCTCCATGCAGGCGGGCATGGTGGGTCGCAc                                                             >  8:233899/1‑149 (MQ=255)                                                                                                    cTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtg                                                >  6:370982/1‑149 (MQ=255)                                                                                                     tACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCACGCCTGCAtgga                                                                      >  8:91783/1‑125 (MQ=255)                                                                                                     tACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCACGCCTGCAtgga                                                                      <  7:91783/126‑2 (MQ=255)                                                                                                       ccggggcggggaggctgtacgtgtcatagccgtgtcgacccgccccGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtgtg                                              >  8:152116‑M2/47‑148 (MQ=255)                                                                                                        gggggCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGa                                            >  3:208224/1‑149 (MQ=255)                                                                                                              ggggaggctgtacgtgtcatagccgtgtcgacccgccccGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGc                                                               >  2:203814‑M2/40‑124 (MQ=255)                                                                                                              ggggaggctgtacgtgtcatagccgtgtcgacccgccccGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGc                                                               <  1:203814‑M2/85‑1 (MQ=255)                                                                                                                   gACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGtt                                 >  7:43087/1‑149 (MQ=255)                                                                                                                     catggCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGa                               >  5:155354/4‑149 (MQ=255)                                                                                                                      acGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGAc                              <  2:2760/149‑1 (MQ=255)                                                                                                                        tacgtgtcatagccgtgtcgacccgccccGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGAcgc                            <  7:152116‑M2/120‑1 (MQ=255)                                                                                                                        ggCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGAcgc                            >  3:300391/1‑149 (MQ=255)                                                                                                                           tATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtgtg                                              <  1:78523/128‑1 (MQ=255)                                                                                                                           tATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCtgtg                                              >  2:78523/1‑128 (MQ=255)                                                                                                                           tATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTa                         >  1:91961/1‑149 (MQ=255)                                                                                                                            aTGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTAc                        >  2:261240/1‑149 (MQ=255)                                                                                                                            aTGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTAc                        >  8:58744/1‑149 (MQ=255)                                                                                                                                cacGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCAtggtg                                                                     <  6:320376/100‑1 (MQ=255)                                                                                                                                cacGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCAtggtg                                                                     >  5:320376/1‑100 (MQ=255)                                                                                                                                cacGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCggg                    <  4:208224/149‑1 (MQ=255)                                                                                                                                  cGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCg                  <  4:238541/149‑1 (MQ=255)                                                                                                                                   gTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGc                   >  2:354119/1‑147 (MQ=255)                                                                                                                                    tACAGCCTCCCCGACCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAg                >  8:206322/1‑149 (MQ=255)                                                                                                                                     aCAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGc               >  1:351517/1‑149 (MQ=255)                                                                                                                                        gCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTgg            <  2:351517/149‑1 (MQ=255)                                                                                                                                         ccTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTggg           >  2:35308/1‑149 (MQ=255)                                                                                                                                         ccTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTgg            <  3:225127/148‑1 (MQ=255)                                                                                                                                         ccTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTgg            >  4:225127/1‑148 (MQ=255)                                                                                                                                               cgccccGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTcg     <  7:58744‑M2/143‑1 (MQ=255)                                                                                                                                                  cccGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCgg  <  1:261240‑M2/146‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GGGCAGCGAGAATGAGTGCGAGCAGTTGCGTCTTGTCGCCGATCTCGGCCAGGGCAACGATAGCGGTGGGGACCAACAGTGATTCCAGCATCAGGATTCCTACGGGGGCGGGTCGACACGGCTATGACACGTACAGCCTCCCCGCCCCGGGTAAGGTGTGCGTGTCATAGGTCTTGTCAAACCCTCGATCCGTCTATGCGGATCTCTCCATGCAGGCGTGCATGGTGGGTCGCACGCGCCATGGTCTGTGGACCAAGTATGTTGACGCGTACCGGGCGAGCTGGGTGCTCGCGG  >  NC_002947/875801‑876094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.