| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1171718 = | 42 (0.700) | 4 (0.070) | 4/248 | NT | 10.3% | coding (1335/1380 nt) | xseA | exodeoxyribonuclease 7 large subunit |
| ? | NC_002947 | 1171779 = | 30 (0.530) | coding (1274/1380 nt) | xseA | exodeoxyribonuclease 7 large subunit | |||||
CACTGCAGGTGGTCAGTCCGCTGGCCACTCTGGCCCGTGGATACAGCATTTTGCTGGATGAGCAAGGCCAGGCCATTCGCAGCGCCGAACAGACCCGCAATGGCCAACGCCTGACCGCCCGCCTGAACGAAGGCGAGTTGCTGGTGCGGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1171869‑1171718‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgggtcTGTTCGGCGCTGCGAATGGCCTGGCCTTGCTCATCCAGCAAAATGCTGTATCCACGGGCCAGAGTGGCCAGCGGACTGACCACCTGCAGTGTCTGCAACTGGGCCTGGAACCGCTGGCGACGGTCCTTGAGCACCTCGCGCATGGC > NC_002947/1171779‑1171924 CACTGCAGGTGGTCAGTCCGCTGGCCACTCTGGCCCGTGGATACAGCATTTTGCTGGATGAGCAAGGCCAGGCCATTCGCAGCGCCGAACAGACCCGCAATGGCCAACGCCTGACCGCCCGCCTGAACGAAGGCGAGTTGCTGGTGCGG < 5:110160/149‑1CACTGCAGGTGGTCAGTCCGCTGGCCACTCTGGCCCGTGGATACAGCATTTTGCTGGATGAGCAAGGCCAGGCCATTCGCAGCGCCGAACAGACCCGCAATGGCCAACGCCTGACCGCCCGCCTGAACGAAGGCGAGTTGCTGGTGCGG < 6:10448/149‑1 TGCAGGTGGTCAGTCCGCTGGCCACTCTGGCCCGTGGATACAGCATTTTGCTGGATGAGCAAGGCCAGGCCATTCGCAGCGCCGAACAGACCCGCAATGGCCAACGCCTGACCGCCCGCCTGAACGAAGGCGAGTTGCTGGTGCGG > 7:300945/1‑146 TGCAGGTGGTCAGTCCGCTGGCCACTCTGGCCCGTGGATACAGCATTTTGCTGGATGAGCAAGGCCAGGCCATTCGCAGCGCCGAACAGACCCGCAATGGCCAACGCCTGACCGCCCGCCTGAACGAAGGCGAGTTGCTGGTGCGG < 8:300945/146‑1 CAGCATTTTGCTGGATGAGCAAGGCCAGGCCATTCGCAGCGCCGAACAGACCCGCAATGGCCAACGCCTGACCGCCCGCCTGAACGAAGGCGAGTTGCTGGTGC < 2:314618/104‑1 AGACCCGCAATGGCCAACGCCTGACCGCCCGCCTGAACGAAGGCGAGTTGCTGGTGCGGGTCTGTTCGGCGCTGCGAATGGCCTGGCCTTGCTCATCCAGCAAAATGCTGTATCCACGGGCCAGAGTGGCCAGCGGACTGACCACCTG > 6:384046/1‑148 ACCCGCAATGGCCAACGCCTGACCGCCCGCCTGAACGAAGGCGAGTTGCTGGTGCGGGTCTGTTCGGCGCTGCGAATGGCCTGGCCTTGCTCATCCAGCAAAATGCTGTATCCACGGGCCAGAGTGGCCAGCGGACTGACCACCTGCAG > 6:137086/1‑149 CCCGCAATGGCCAACGCCTGACCGCCCGCCTGAACGAAGGCGAGTTGCTGGTGCGGGTCTGTTCGGCGCTGCGAATGGCCTGGCCTTGCTCATCCAGCAAAATGCTGTATCCACGGGCCAGAGTGGCCAGCGGACTGACCACCTGCAGT > 8:352760/1‑149 CCAACGCCTGACCGCCCGCCTGAACGAAGGCGAGTTGCTGGTGCGGGTCTGTTCGGCGCTGCGAATGGCCTGGCCTTGCTCATCCAGCAAAATGCTGTATCCACGGGCCAGAGTGGCCAGCGGACTGACCACCTGCAGTGTCTGCAACT < 5:137086/149‑1 GGGTCTGTTCGGCGCTGCGAATGGCCTGGCCTTGCTCATCCAGCAAAATGCTGTATCCACGGGCCAGAGTGGCCAGCGGACTGACCACCTGCAGTGTCTG < 7:88273/100‑1 GGGTCTGTTCGGCGCTGCGAATGGCCTGGCCTTGCTCATCCAGCAAAATGCTGTATCCACGGGCCAGAGTGGCCAGCGGACTGACCACCTGCAGTGTCTG > 8:88273/1‑100 GTCTGTTCGGCGCTGCGAATGGCCTGGCCTTGCTCATCCAGCAAAATGCTGTATCCACGGGCCAGAGTGGCCAGCGGACTGACCACCTGCAGTGTCTGCAACTGGGCCTGGAACCGCTGGCGACGGTCCTTGAGCACCTCGCGCATGGC > 1:276952/1‑149 CACTGCAGGTGGTCAGTCCGCTGGCCACTCTGGCCCGTGGATACAGCATTTTGCTGGATGAGCAAGGCCAGGCCATTCGCAGCGCCGAACAGACCCGCAATGGCCAACGCCTGACCGCCCGCCTGAACGAAGGCGAGTTGCTGGTGCGGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1171869‑1171718‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgggtcTGTTCGGCGCTGCGAATGGCCTGGCCTTGCTCATCCAGCAAAATGCTGTATCCACGGGCCAGAGTGGCCAGCGGACTGACCACCTGCAGTGTCTGCAACTGGGCCTGGAACCGCTGGCGACGGTCCTTGAGCACCTCGCGCATGGC > NC_002947/1171779‑1171924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |