| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1841236 | 63 (1.050) | 4 (0.070) | 4/254 | NT | 5.8% | coding (767/1029 nt) | ldhA | D‑lactate dehydrogenase |
| ? | NC_002947 | = 1841272 | 70 (1.210) | coding (731/1029 nt) | ldhA | D‑lactate dehydrogenase | |||||
GCAAGGGCAGGTCGGAGCGGTCCTCGAAGAACAGTTGGGCTTCTTCTTCGTAGACGTCCAGGCCCAGGTAGCCAAGCTGGCCGCTTTTCAGTGCGTCGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1841135‑1841236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcaACACCGGTCGCGGTGCGTTGGTCGACACCCCGGCGCTGATCGACGCACTGAAAAGCGGCCAGCTTGGCTACCTGGGCCTGGACGTCTACGAAGAAGAAGCCCAACTGTTCTTCGAGGACCGCTCCGACCTGCCCTTGCAAGACG < NC_002947/1841272‑1841129 GCAAGGGCAGGTCGGAGCGGTCCTCGAAGAACAGTTGGGCTTCTTCTTCGTAGACGTCCAGGCCCAGGTAGCCAAGCTGGCCGCTTTTCAGTGCGTCGATCAACACCGGTCGCGGTGCGTTGGTCGACACCCCGGCGCTGATCG < 1:110710/144‑1GCAAGGGCAGGTCGGAGCGGTCCTCGAAGAACAGTTGGGCTTCTTCTTCGTAGACGTCCAGGCCCAGGTAGCCAAGCTGGCCGCTTTTCAGTGCGTCGATCAACACCGGTCGCGGTGCGTTGGTCGACACCCCGGCGCTGATCG > 2:110710/1‑144 GGGCAGGTCGGAGCGGTCCTCGAAGAACAGTTGGGCTTCTTCTTCGTAGACGTCCAGGCCCAGGTAGCCAAGCTGGCCGCTTTTCAGTGCGTCGATCAACACCGGTCGCGGTGCGTTGGTCGACACCCCGGCGCTGATCGACGCACTG > 3:300106/1‑148 GGGCAGGTCGGAGCGGTCCTCGAAGAACAGTTGGGCTTCTTCTTCGTAGACGTCCAGGCCCAGGTAGCCAAGCTGGCCGCTTTTCAGTGCGTCGATCAACACCGGTCGCGGTGCGTTGGTCGACACCCCGGCGCTGATCGACGCACTG < 4:300106/148‑1 GATCAACACCGGTCGCGGTGCGTTGGTCGACACCCCGGCGCTGATCGACGCACTGAAAAGCGGCCAGCTTGGCTACCTGGGCCTGGACGTCTACGAAGAAGAAGCCCAACTGTTCTTCGAGGACCGCTCCGACCTGCCCTTGCAAGAC > 7:89159/1‑148 ATCAACACCGGTCGCGGTGCGTTGGTCGACACCCCGGCGCTGATCGACGCACTGAAAAGCGGCCAGCTTGGCTACCTGGGCCTGGACGTCTACGAAGAAGAAGCCCAACTGTTCTTCGAGGACCGCTCCGACCTGCCCTTGCAAGACG < 7:307841/148‑1 GCAAGGGCAGGTCGGAGCGGTCCTCGAAGAACAGTTGGGCTTCTTCTTCGTAGACGTCCAGGCCCAGGTAGCCAAGCTGGCCGCTTTTCAGTGCGTCGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1841135‑1841236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcaACACCGGTCGCGGTGCGTTGGTCGACACCCCGGCGCTGATCGACGCACTGAAAAGCGGCCAGCTTGGCTACCTGGGCCTGGACGTCTACGAAGAAGAAGCCCAACTGTTCTTCGAGGACCGCTCCGACCTGCCCTTGCAAGACG < NC_002947/1841272‑1841129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |