| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2397599 = | 38 (0.630) | 5 (0.090) | 5/254 | NT | 11.7% | coding (2058/3636 nt) | PP_2100 | two‑component system sensor protein |
| ? | NC_002947 | 2397657 = | 39 (0.670) | coding (2000/3636 nt) | PP_2100 | two‑component system sensor protein | |||||
AGGCGGATTACCAGAAAGTCATGGCGGCGGGCTCACCACTGATCAAGGACCGTCCATTACGGATCAAGGGCCGGGACCTGACCATCTACCACTGGATCCTGCCGTACCGCGACTCCCTGGGTGAGGTGCAGGGGATCATCGGCGGCTGGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2397750‑2397599‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggatcCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGAGCCCGCCGCCATGACTTTCTGGTAATCCGCCTGGATCTGCCGAGCCTGCTCG > NC_002947/2397657‑2397770 AGGCGGATTACCAGAAAGTCATGGCGGCGGGCTCACCACTGATCAAGGACCGTCCATTACGGATCAAGGGCCGGGACCTGACCATCTACCACTGGATCCTGCCGTACCGCGACTCCCTGGGTGAGGTGCAGGGGATCATCGGCGGCTGG < 5:352169/149‑1 CATCTACCACTGGATCCTGCCGTACCGCGACTCCCTGGGTGAGGTGCAGGGGATCATCGGCGGCTGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGAGCCCGCCGCCATGACTT > 5:75726/1‑149 CTGGATCCTGCCGTACCGCGACTCCCTGGGTGAGGTGCAGGGGATCATCGGCGGCTGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGAGCCCGCCGCCATAACTTTCTGGTAAT > 7:349041/1‑149 GATCCTGCCGTACCGCGACTCCCTGGGTGAGGTGCAGGGGATCATCGGCGGCTGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGAGCCCGCCGCCATGACTTTCTGGTAATCCG > 6:174156/1‑149 GACTCCCTGGGGGAGGTGCAGGGGATCATCGGCGGCTGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGAGCCCGCCGCCATGACTTTCTGGTAATCCGCCTGGATCTGCCGAGC < 6:75726/149‑1 GGTGAGGTGCAGGGGATCATCGGCGGCTGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGAGCCCGCCGCCATGACTTTCTGGTAATCCGCCTGGATCTGCCGAGCCTGCTCG < 5:174156/147‑1 AGGCGGATTACCAGAAAGTCATGGCGGCGGGCTCACCACTGATCAAGGACCGTCCATTACGGATCAAGGGCCGGGACCTGACCATCTACCACTGGATCCTGCCGTACCGCGACTCCCTGGGTGAGGTGCAGGGGATCATCGGCGGCTGGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2397750‑2397599‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggatcCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGAGCCCGCCGCCATGACTTTCTGGTAATCCGCCTGGATCTGCCGAGCCTGCTCG > NC_002947/2397657‑2397770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |