New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2397599 =	38 (0.630)	5 (0.090)	5/254	NT	11.7%	coding (2058/3636 nt)	PP_2100	two‑component system sensor protein
	?	NC_002947	2397657 =	39 (0.670)					coding (2000/3636 nt)	PP_2100	two‑component system sensor protein

TTCCAGCATGCCGATCACGGCATTCATCGGGGTGCGGATTTCGTGGCTGATGGTCGCCAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGAGCCCGCCGCCATGACTTTCTGGTAATC  >  NC_002947/2397452‑2397745                                                                                                                                                    |                                                                                                                                                   ttCCAGCATGCCGATCACGGCATTCATCGGGGTGCGGATTTCGTGGCTGATGGTCGCCAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGa                                                                                                                                                   >  4:134552/1‑149 (MQ=255)           ccGATCACGGCATTCATCGGGGTGCGGATTTCGTGGCTGATGGTCGCCAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAgccgc                                                                                                                                          <  8:107959/148‑1 (MQ=255)             gATCACGGCATTCATCGGGGTGCGGATTTCGTGGCTGATGGTCGCCAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCga                                                                                                                                       <  4:352172/149‑1 (MQ=255)                     cATTCATCGGGGTGCGGATTTCGTGGCTGATGGTCGCCAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATcccc                                                                                                                               <  6:153020/149‑1 (MQ=255)                          aTCGGGGTGCGGATTTCGTGGCTGATGGTCGCCAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCAc                                                                                                                          >  7:268484/1‑149 (MQ=255)                               ggTGCGGATTTCGTGGCTGATGGTCGCCAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTc                                                                                                                       <  4:253675/147‑1 (MQ=255)                                  cgagcaggctcggcagatccaggcggattaccagaaagtcatggcggcgggctcaccactgatcaaggaccgtccattacggatcaagggccgggacctgaccatctaccactgGATCCAGCCGCCGATGATCCCCTGCACCTCAcc                                                                                                                    <  5:174156‑M1/33‑1 (MQ=255)                                    ggATTTCGTGGCTGATGGTCGCCAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAgg                                                                                                                <  5:5091/149‑1 (MQ=255)                                         gctcggcagatccaggcggattaccagaaagtcatggcggcgggctcaccactgatcaaggaccgtccattacggatcaagggccgggacctgaccatctaccactgGATCCAGCCGCCGATGATCCCCTGCACCTCCCCCAGGGAGTc                                                                                                           <  6:75726‑M1/42‑1 (MQ=255)                                              gCTGATGGTCGCCAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCCCCTCACCCCGGGAGTCGCgg                                                                                                       >  4:120267/1‑148 (MQ=255)                                                     gTCGCCAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCa                                                                                                <  3:158067/148‑1 (MQ=255)                                                         cggattaccagaaagtcatggcggcgggctcaccactgatcaaggaccgtccattacggatcaagggccgggacctgaccatctaccactgGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATc                                                                                           >  6:174156‑M1/92‑149 (MQ=255)                                                         ccAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATc                                                                                           >  8:160929/1‑149 (MQ=255)                                                          cAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATc                                                                                           >  3:207814/1‑148 (MQ=255)                                                          cAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATc                                                                                           >  6:106243/1‑148 (MQ=255)                                                           aGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCa                                                                                         <  1:222/149‑1 (MQ=255)                                                            ggAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAg                                                                                        <  3:324753/149‑1 (MQ=255)                                                            attaccagaaagttatggcggcgggctcaccactgatcaaggaccgtccattacggatcaagggccgggacctgaccatctaccactgGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAg                                                                                        >  7:349041‑M1/89‑149 (MQ=255)                                                             gAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGt                                                                                       >  1:378986/1‑149 (MQ=255)                                                                     aagtcatggcggcgggctcaccactgatcaaggaccgtccattacggatcaagggccgggacctgaccatctaccactgGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATg                                                                               >  5:75726‑M1/80‑149 (MQ=255)                                                                       ttGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGt                                                                             >  2:14224/1‑149 (MQ=255)                                                                          accccgTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAg                                                                          <  1:324394/144‑1 (MQ=255)                                                                                   gcgtcgtcgGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGcc                                                                 >  7:4465/4‑149 (MQ=255)                                                                                    cATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGccc                                                                <  1:309880/149‑1 (MQ=255)                                                                                     aTCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCt                                                               <  5:15533/149‑1 (MQ=255)                                                                                       ccgagctctgctgCTTGGCCGGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCtt                                                              <  7:121665/141‑1 (MQ=255)                                                                                         tcgGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGAt                                                           <  8:4465/149‑1 (MQ=255)                                                                                           ggCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATc                                                          <  1:14224/148‑1 (MQ=255)                                                                                              ctgctgCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGt                                                       >  4:92625/1‑148 (MQ=255)                                                                                               tgctgcTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCAAGTGGTAGATGGTCAGGTCCCTGCCCtc                                                              >  8:121665/1‑139 (MQ=255)                                                                                                 gggctGGGCCTGGCGCAGCTCCAGGACCAGTTTGCGGCGTTCGCTGATGTCTATCCAGCCGACGATGATCCCCTGCACATCACCCAGGTAGTCGCGGTACGGCAGGATCCAGTGGTAGATTGTCAGGTCCCGGCCCTTGATCCGTaa                                                     <  6:372831/145‑1 (MQ=255)                                                                                                 cttctTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGTTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTaa                                                     <  6:377943/144‑1 (MQ=255)                                                                                                   gctTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGa                                                 >  1:188925/1‑149 (MQ=255)                                                                                                     ttGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACg                                               <  7:160929/149‑1 (MQ=255)                                                                                                       ggCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACg                                               <  5:106243/147‑1 (MQ=255)                                                                                                        gCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTc                                            <  4:207814/149‑1 (MQ=255)                                                                                                         ccTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTcc                                           >  2:43210/1‑149 (MQ=255)                                                                                                         ccTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGCCCCTTGATCCGTAATGGACGGTcc                                           >  6:215939/1‑149 (MQ=255)                                                                                                           tGGCGCAGCTCCAGGACCAGTTGGGGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCtt                                         <  2:378986/149‑1 (MQ=255)                                                                                                                   cTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAgtg                                 >  2:332851/1‑149 (MQ=255)                                                                                                                   cTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAgtg                                 <  1:43210/149‑1 (MQ=255)                                                                                                                   cTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCAGCACCTCCCCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAgtg                                 <  8:268484/149‑1 (MQ=255)                                                                                                                       aGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGa                             <  3:134552/149‑1 (MQ=255)                                                                                                                             aGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGAGCccgc                       >  5:125375/1‑149 (MQ=255)                                                                                                                                               aTGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACTGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGAGCCCGCCGCCATGACTTTCTgt       <  6:125375/147‑2 (MQ=255)                                                                                                                                               aTGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGAGCCCGCCGCCATGACTTTCTgg       <  1:332851/147‑1 (MQ=255)                                                                                                                                                  tCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTGGATCAGTGGTGAGCCCGCCGCCATGACTTTCTGGTAATc  >  5:11517/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   TTCCAGCATGCCGATCACGGCATTCATCGGGGTGCGGATTTCGTGGCTGATGGTCGCCAGGAACGTGCTCTTGGCGCGGTTGGCATCGTCGGCCTGCTGCTTGGCCTGGCGCAGCTCCAGGACCAGTTGGCGGCGTTCGCTGATGTCGATCCAGCCGCCGATGATCCCCTGCACCTCACCCAGGGAGTCGCGGTACGGCAGGATCCAGTGGTAGATGGTCAGGTCCCGGCCCTTGATCCGTAATGGACGGTCCTTGATCAGTGGTGAGCCCGCCGCCATGACTTTCTGGTAATC  >  NC_002947/2397452‑2397745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.