| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2657073 = | 41 (0.680) | 4 (0.070) | 4/252 | NT | 9.2% | coding (539/1341 nt) | pabB | aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex |
| ? | NC_002947 | 2657137 = | 40 (0.700) | coding (475/1341 nt) | pabB | aminodeoxychorismate synthase/para‑aminobenzoate synthase multi‑enzyme complex | |||||
ACTGGTCAGCGATCACTTGCTCGGCACCAGCCAGCTGGTGTTCCACCCTAGCCTGGCCGGCGACGAGCGCGAACGCCTGATCAGCCTGTTCCAGGACACCAGCGCCACCACCGGCGACTTCCGGCTGCTCGCGCCGATGGCCGGTGACCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2657225‑2657073‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggaACAGGCTGATCAGGCGTTCGCGCTCGTCGCCGGCCAGGCTAGGGTGGAACACCAGCTGGCTGGTGCCGAGCAAGTGATCGCTGACCAGTGCCCAGGCATACAGGCCCAGTTGTGCGTCTGGCAGGCCCAGGTCGTCCACGGCCAG > NC_002947/2657137‑2657281 ACTGGTCAGCGATCACTTGCTCGGCACCAGCCAGCTGGTGTTCCACCCTAGCCTGGCCGGCGACGAGCGCGAACGCCTGATCAGCCTGTTCCAGGACACCAGCGCCACCACCGGCGACTTCCGGCTGCTCGCGCCGATGGCCGGTGACC > 1:158572/1‑149ACTGGTCAGCGATCACTTGCTCGGCACCAGCCAGCTGGTGTTCCACCCTAGCCTGGCCGGCGACGAGCGCGAACGCCTGATCAGCCTGTTCCAGGACAACAGCGCCACCACCGGCGACTTCCGGCTGCTCGCGCCGATGGCCGGTGACC > 5:205575/1‑149 ggcctggGTTCCAGGACACCAGCGCCACCACCGGCGACTTCCGGCTGCTCGCGCCGATGGCCGGTGACCTGGAACAGGCTGATCAGGCGTTCGCGCTCGTCGCCGGCCAGGCTAGGGTGGAACACCAGCTGGCTGGTGCCGAGCAAGTG < 2:188953/142‑1 TGTTCCAGGACACCAGCGCCACCACCGGCGACTTCCGGCTGCTCGCGCCGATGGCCGGTGACCTGGAACAGGCTGATCAGGCGTTCGCGCTCGTCGCCGGCCAGGCTAGGGTGGAACACCAGCTGGCTGGTGCCGAGCAAGTGATCGCT > 1:201425/1‑149 GTTCCAGGACACCAGCGCCACCACCGGCGACTTCCGGCTGCTCGCGCCGATGGCCGGTGACCTGGAACAGGCTGATCAGGCGTTCGCGCTCGTCGCCGGCCAGGCTAGGGTGGAACACCAGCTGGCTGGTGCCGAGCAAGTGATCGCT > 4:44192/1‑148 GATGGCCGGTGACCTGGAACAGGCTGATCAGGCGTTCGCGCTCGTCGCCGGCCAGGCTAGGGTGGAACACCAGCTGGCTGGTGCCGAGCAAGTGATCGCTGACCAGTGCCCAGGCATACAGGCCCAGTTGTGCGTCTGGCAGGCCCAGG < 3:44192/149‑1 aTGGAACAGGCTGATCAGGCGTTCGCGCTCGTCGCCGGCCAGGCTAGGGTGGAACACCAGCTGGCTGGTGCCGAGCAAGTGATCGCTGACCAGTGCCCAGGCATACAGGCCCAGTTGTGCTTATGGCAGGCACAGGTCGTCCACGGC > 4:131031/2‑147 TGGAACAGGCTGATCAGGCGTTCGCGCTCGTCGCCGGCCAGGCTAGGGTGGAACACCAGCTGGCTGGTGCCGAGCAAGTGATCGCTGACCAGTGCCCAGGCATACAGGCCCAGTTGTGCGTCTGGCAGGCCCAGGTCGTCCACGGCCAG > 5:40799/1‑149 GAACAGGCTGATCAGGCGTTCGCGCTCGTCGCCGGCCAGGCTAGGGTGGAACACCAGCTGGCTGGTGCCGAGCAAGTGATCGCTGACCAGTGCCCAGGCATACAGGCCCAGTTGTGCGTCTGGCAGGCCCAGGTCGTCCACGGCCAG < 3:275739/147‑1 GAACAGGCTGATCAGGCGGTCGCGCTCGTCGCCGGCCAGGCTAGGGTGGAACACCAGCTGGCGGGTGCCGAGCAAGTGATCGCTGACCAGTGCCCAGGCATACAGGCCCAGTTGTGCGGCTGGCAGGCCCAGGTCGTCCACGGCCAG < 1:250326/147‑1 ACTGGTCAGCGATCACTTGCTCGGCACCAGCCAGCTGGTGTTCCACCCTAGCCTGGCCGGCGACGAGCGCGAACGCCTGATCAGCCTGTTCCAGGACACCAGCGCCACCACCGGCGACTTCCGGCTGCTCGCGCCGATGGCCGGTGACCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2657225‑2657073‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggaACAGGCTGATCAGGCGTTCGCGCTCGTCGCCGGCCAGGCTAGGGTGGAACACCAGCTGGCTGGTGCCGAGCAAGTGATCGCTGACCAGTGCCCAGGCATACAGGCCCAGTTGTGCGTCTGGCAGGCCCAGGTCGTCCACGGCCAG > NC_002947/2657137‑2657281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |