| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2697776 = | 39 (0.650) | 4 (0.070) | 4/252 | NT | 10.0% | coding (521/1149 nt) | PP_2364 | hypothetical protein |
| ? | NC_002947 | 2697837 = | 35 (0.610) | coding (460/1149 nt) | PP_2364 | hypothetical protein | |||||
CGCCACAACCAGCTGATCGAACGTGCCTGCCAACTCCCGGGGGTCGAGTTGCTGGCCAGCGGCCGCAGTGTCCAGGGCCGTGATATCCCCCTGCTGCGGGCAGGCGACGGTGCCGAAGGCAAGCGCAAGCTGTGGCTGATTGCCCAGCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2697927‑2697776‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcaGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATCTGGTCCTGTTCAGCCTTCAC > NC_002947/2697837‑2697984 ctCCACAACCAGCTGATCGAACGTGCCTGCCAACTCCCGGGGGTCGAGTTGCTGGCCAGCGGCCGCATTGTCCAGGGCCGTGATATCCCCCTGCTGCGGGCAGGCGACGGTGCCGAAGGCAAGCGCAAGCTGTGGCTGATTGCCCAGCA < 5:338361/147‑1CGCCACAACCAGCTGATCGAACGTGCCTGCCAACTCCCGGGGGTCGAGTTGCTGGCCAGCGGCCGCAGTGTCCAGGGCCGTGATATCCCCCTGCTGCGGGCAGGCGACGGTGCCGAAGGCAAGCGCAAGCTGTGGCTGATTGCCCAGCA < 1:356043/149‑1 GCCACAACCAGCTGATCGAACGTGCCTGCAAACTCCCGGGGGTCGAGTTGCTGGCCAGCGGCCGCAGTGTCCAGGGCCGTGATATCCCCCTGCTGCGGGCAGGCGACGGTGCCGAAGGCAAGCGCAAGCTGTGGCTGATTGCCCAGCAG > 1:220105/1‑149 CCTGCTGCGGGCAGGCGACGGTGCCGAAGGCAAGCGCAAGCTGTGGCTGATTGCCCAGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTG > 1:350084/1‑149 CCTGCTGCGGGCAGGCGACGGTGCCGAAGGCAAGCGCAAGCTGTGGCTGATTGCCCAGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTG < 2:350084/149‑1 CTGCTGCGGGCAGGCGACGGTGCCGAAGGCAAGCGCAAGCTGTGGCTGATTGCCCAGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCCGCTGGTTGT > 3:16567/1‑149 GCTGCGGGCAGGCGACGGTGCCGAAGGCAAGCGCAAGCTGTGGCTGATTGCCCAGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGG > 2:178091/1‑149 AGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATCTGGTCCTGTTCAGCCTTCAC < 3:113000/149‑1 CGCCACAACCAGCTGATCGAACGTGCCTGCCAACTCCCGGGGGTCGAGTTGCTGGCCAGCGGCCGCAGTGTCCAGGGCCGTGATATCCCCCTGCTGCGGGCAGGCGACGGTGCCGAAGGCAAGCGCAAGCTGTGGCTGATTGCCCAGCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2697927‑2697776‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcaGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATCTGGTCCTGTTCAGCCTTCAC > NC_002947/2697837‑2697984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |