New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2697776 =	39 (0.650)	4 (0.070)	4/252	NT	10.0%	coding (521/1149 nt)	PP_2364	hypothetical protein
	?	NC_002947	2697837 =	35 (0.610)					coding (460/1149 nt)	PP_2364	hypothetical protein

GCCAGCAATTGCTCGACCACCGTATCGTTGGCCTGCAGGCGGTCGATCACGCCTTCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATCTGGTCCTGTTCAGCCTTCACC  >  NC_002947/2697689‑2697985                                                                                                                                                     |                                                                                                                                                     acaaccagcggatcgaacgtgcctgccaactcccgggggtcgagttgctggccagcggccgcagtgtccagggccgtgatatcccccTGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGcagcag                                                                                                                                                      >  3:16567‑M1/88‑149 (MQ=255)  ccAGCAATTGCTCGACCACCGTATCGTTGGCCTGCAGGCGGTCGATCACGCCTTCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAgg                                                                                                                                                     <  6:145888/149‑1 (MQ=255)  caaccagctgatcgaacgtgcctgccaactcccgggggtcgagttgctggccagcggccgcagtgtccagggccgtgatatcccccTGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAgg                                                                                                                                                     >  1:350084‑M1/87‑149 (MQ=255)  caaccagctgatcgaacgtgcctgccaactcccgggggtcgagttgctggccagcggccgcagtgtccagggccgtgatatcccccTGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAgg                                                                                                                                                     <  2:350084‑M1/63‑1 (MQ=255)   cAGCAATTGCTCGACCACCGTATCGTTGGCCTGCAGGCGGTCGATCACGCCTTCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAggg                                                                                                                                                    <  6:366350/149‑1 (MQ=255)    aGCAATTGCTCGACCACCGTATCGTTGGCCTGCAGGCGGTCGATCACGCCTTCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAgggg                                                                                                                                                   <  6:121424/149‑1 (MQ=255)    aGCAATTGCTCGACCACCGTATCGTTGGCCTGCAGGCGGTCGATCACGCCTTCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAgggg                                                                                                                                                   <  2:243620/149‑1 (MQ=255)                  caccGTATCGTTGGCCTGCAGGCGGTCGATCACGCCTTCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCt                                                                                                                                     >  8:280568/1‑149 (MQ=255)                     cGTATCGTTGGCCTGCAGGCGGTCGATCACGCCTTCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGa                                                                                                                                  <  7:283883/149‑1 (MQ=255)                                    cAGGCGGTCGATCACGCCTTCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTg                                                                                                                    <  1:280840/148‑1 (MQ=255)                                           tCGATCACGCCTTCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTg                                                                                                                                    <  6:321000/125‑1 (MQ=255)                                           tCGATCACGCCTTCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTg                                                                                                                                    >  5:321000/1‑125 (MQ=255)                                           tCGACCACGCCAGCCCTGACCCATTAGCCCATGCGCTCGCCCGCAGGCCCCCCGGCAACCACCCACAGCTTGCGCCTGCCTTCCGCACCCTCGCCTGCCCGCAGCAGGGGGATATCCCGGCCCTGGACACTGCGGCCGCTGGCCAGCaa                                                                                                            <  8:266120/149‑1 (MQ=255)                                                     cTTCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGAccccc                                                                                                  >  5:37214/1‑149 (MQ=255)                                                       tCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCgg                                                                                                >  2:220105/1‑149 (MQ=255)                                                             aaCCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGtt                                                                                           <  5:119586/148‑1 (MQ=255)                                                                       ccATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGt                                                                                >  2:338530/1‑149 (MQ=255)                                                                       ccATCTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCATTCGGAACACTCTCCTGCCCGCAGAAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGt                                                                                >  5:260286/1‑149 (MQ=255)                                                                         aTGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTc                                                                              <  4:76701/149‑1 (MQ=255)                                                                             gCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTggca                                                                                       <  7:106936/136‑1 (MQ=255)                                                                             gCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTggca                                                                                       >  8:106936/1‑136 (MQ=255)                                                                               tCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAg                                                                        >  2:163652/1‑149 (MQ=255)                                                                                 gCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCt                                                                      >  7:319814/1‑149 (MQ=255)                                                                                 gCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCt                                                                      >  4:113000/1‑149 (MQ=255)                                                                                   ccGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTgg                                                                    >  1:271095/1‑149 (MQ=255)                                                                                      cctgctgcgggcaggcgacggtgccgaaggcaagcgcaagctgtggctgattgcccagcagcaGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTtg                                                                 <  2:350084‑M2/86‑1 (MQ=255)                                                                                      cctgctgcgggcaggcgacggtgccgaaggcaagcgcaagctgtggctgattgcccagcagcaGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTtg                                                                 >  1:350084‑M2/64‑149 (MQ=255)                                                                                       ctgctgcgggcaggcgacggtgccgaaggcaagcgcaagctgtggctgattgcccagcagcaGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCCGCTGGTtgt                                                                >  3:16567‑M2/63‑149 (MQ=255)                                                                                         gctgcgggcaggcgacggtgccgaaggcaagcgcaagctgtggctgattgcccagcagcaGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTgg                                                              >  2:178091‑M2/61‑149 (MQ=255)                                                                                          CTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTTGCAGGCACGTTCGATCAGCTGGTTGTGGc                                                             >  1:220105‑M1/1‑149 (MQ=255)                                                                                           TGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCg                                                            <  1:356043‑M1/149‑1 (MQ=255)                                                                                           TGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACAATGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTgtggag                                                            <  5:338361‑M1/149‑3 (MQ=255)                                                                                              tgGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCggg                                                          >  4:370801/1‑148 (MQ=255)                                                                                                   aaTCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCAcgcg                                                    >  6:155017/1‑149 (MQ=255)                                                                                                    aTCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCgg                                                   <  8:319814/149‑1 (MQ=255)                                                                                                     tCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCggg                                                  <  1:338530/149‑1 (MQ=255)                                                                                                         ccACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTTGCGGGCACGCGGGTa                                                <  6:326791/147‑1 (MQ=255)                                                                                                         ccACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTa                                                >  5:326791/1‑147 (MQ=255)                                                                                                         ccACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAAATCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTTGCGGGCACGCGGGAAgg                                              >  8:29159/1‑149 (MQ=255)                                                                                                          cacaGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAggg                                             <  8:267340/149‑1 (MQ=255)                                                                                                              gcttgcgcttgcCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGAGGGCACGCGGGTAGGGCTc                                          >  6:307695/1‑148 (MQ=255)                                                                                                                  gcgcttgcCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAg                                      <  3:111849/148‑1 (MQ=255)                                                                                                                   cgcttgcCTTCGGCTCCGTCGCATGCCCGCATCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGt                                     <  6:260286/148‑1 (MQ=255)                                                                                                                         ccTTCGGCACCGTCGCCTGTCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGaa                              >  8:279089/1‑149 (MQ=255)                                                                                                                             cGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCa                           <  6:37214/148‑1 (MQ=255)                                                                                                                                cACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATc                       >  7:235450/1‑149 (MQ=255)                                                                                                                                cACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATc                       >  7:230673/1‑149 (MQ=255)                                                                                                                                    gTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATCTGGt                   <  8:230673/149‑1 (MQ=255)                                                                                                                                    gTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATCTGGt                   <  8:235450/149‑1 (MQ=255)                                                                                                                                          tGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATCTGGTCCTGt              >  1:257065/1‑148 (MQ=255)                                                                                                                                            cccGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATCTGGTCCTGTTCa           <  2:271095/149‑1 (MQ=255)                                                                                                                                                    aGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATCTGGTCCTGTTCAGCCTTCAc   <  3:113000‑M2/148‑1 (MQ=255)                                                                                                                                                     gggggATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATCTGGTCCTGTTCAGCCTTCAcc  <  3:329623/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GCCAGCAATTGCTCGACCACCGTATCGTTGGCCTGCAGGCGGTCGATCACGCCTTCCATGAACCATTCGGCCATGTGCTCGCCCGGATGCTGCTGGGCAATCAGCCACAGCTTGCGCTTGCCTTCGGCACCGTCGCCTGCCCGCAGCAGGGGGATATCACGGCCCTGGACACTGCGGCCGCTGGCCAGCAACTCGACCCCCGGGAGTTGGCAGGCACGTTCGATCAGCTGGTTGTGGCGGGCACGCGGGTAGGGCTCGAAGTAGGCGAACCAGATCTGGTCCTGTTCAGCCTTCACC  >  NC_002947/2697689‑2697985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.