| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2729599 = | 47 (0.780) | 3 (0.050) | 3/248 | NT | 6.4% | coding (46/1044 nt) | PP_2392 | MFS transporter |
| ? | NC_002947 | 2729650 = | 43 (0.760) | coding (97/1044 nt) | PP_2392 | MFS transporter | |||||
AAAGCGCAGCACCAGGGTCAGCGTGTTGGAGTTCGACAAGGCCGTCAGCCCGTTGAACAGCACGAAGCCGATGATCGCCAGCAACAGCGCCCGGCGCCGATACCAGCCTTGGGTCAACGTCACCAACGGGATGGCGGTCAGTAACGAGCCCAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2729754‑2729599‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaaggcTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCAACACGCTGACCCTGGTGCTGCGCTTTTTCACGGGGGCTGCGGCCGGCCTGGCATGGGGCCTGA > NC_002947/2729650‑2729791 AAAGCGCAGCACCAGGGTCAGCGTGTTGGAGTTCGACAAGGCCGTCAGCCCGTTGAACAGCACGAAGCCGATGCTCGCCAGCAACAGCGCCCGGCGCCGATACCACCCTTCGGTCAACGTCACCAACGCGATGGCGGTCAGTAACGAGC > 7:64622/1‑149 GCGCAGCACCAGGGGCAGCGTGTTGGAGTTCGACAAGGCCGTCAGCCCGTTGAACAGCACGAAGCCGATGATCGCCAGCAACAGCGCCCGGCGCCGATACCAGCCTTGGGTCAACGTCACCAACGGGATGGCGGTCAGTAACGAGCCCA < 6:72204/149‑1 GGAGTTCGACAAGGCCGTCAGCCCGTTGAACAGCACGAAGCCGATGATCGCCAGCAACAGCGCCCGGCGCCGATACCAGCCTTGGGTCAACGTCACCAACGGGATGGCGGTCAGTAACGAGC < 1:226783/122‑1 GGAGTTCGACAAGGCCGTCAGCCCGTTGAACAGCACGAAGCCGATGATCGCCAGCAACAGCGCCCGGCGCCGATACCAGCCTTGGGTCAACGTCACCAACGGGATGGCGGTCAGTAACGAGC > 2:226783/1‑122 TTCGACAAGGCCGTCAGCCCGTAGAACAGCACGAAGCCGATGATCGCCAGCAACAGCGCCCGGCGCCGATACCAGCCTTGGGTCAACGTCACCAACGGGATGGCGGTCAGTAACGAGCCCAAGG < 3:64734/124‑1 TTCGACAAGGCCGTCAGCCCGTAGAACAGCACGAAGCCGATGATCGCCAGCAACAGCGCCCGGCGCCGATACCAGCCTTGGGTCAACGTCACCAACGGGATGGCGGTCAGTAACGAGCCCAAGG > 4:64734/1‑124 AGCCTTGGGTCAACGTCACCAACGGGATGGCGGTCAGTAACGAGCCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCAACACGCTGACCCTGGTGC > 4:318732/1‑149 GCCTTGGGTCAACGTCACCAACGGGATGGCGGTCAGTAACGAGCCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTAGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCC > 5:359329/1‑129 GCCTTGGGTCAACGTCACCAACGGGATGGCGGTCAGTAACGAGCCCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTAGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCC < 6:359329/129‑1 CCAAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCAACACGCTGACCCTGGTGCTGCGCTTTTTCACGGGGGCTGCGGCCGGCCTGGCATGGGGCCTGA > 3:32818/1‑149 AAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCAACACGCTGACCCTGGTGCTGCGCTTTTTCACGGGGGCTGCGGCCG < 1:177071/129‑1 AAGGCTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCAACACGCTGACCCTGGTGCTGCGCTTTTTCACGGGGGCTGCGGCCG > 2:177071/1‑129 AAAGCGCAGCACCAGGGTCAGCGTGTTGGAGTTCGACAAGGCCGTCAGCCCGTTGAACAGCACGAAGCCGATGATCGCCAGCAACAGCGCCCGGCGCCGATACCAGCCTTGGGTCAACGTCACCAACGGGATGGCGGTCAGTAACGAGCCCAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2729754‑2729599‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaaggcTGGTATCGGCGCCGGGCGCTGTTGCTGGCGATCATCGGCTTCGTGCTGTTCAACGGGCTGACGGCCTTGTCGAACTCCAACACGCTGACCCTGGTGCTGCGCTTTTTCACGGGGGCTGCGGCCGGCCTGGCATGGGGCCTGA > NC_002947/2729650‑2729791 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |