| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2928415 = | 34 (0.560) | 4 (0.070) | 4/252 | NT | 11.9% | coding (1682/2472 nt) | PP_2565 | UvrD/REP family helicase |
| ? | NC_002947 | 2928448 = | 27 (0.470) | coding (1715/2472 nt) | PP_2565 | UvrD/REP family helicase | |||||
GCCGGCGACGGGAACGCCTTGGTGAACTCCATGAAATACTTGGGCGAACTGCCACGCCAGCCGTAGATCGATTGCCAGTCGTCACCCACGCACAGCAACGACGAATGCTGGGCATGG‑CGCCCGGTGTGCATGGCCGGGCCGCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2928562‑2928415‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccATGCCCAGCATTCGTCGTTGCTGTGCGTGGGTGACGACTGGCAATCGATCTACGGCTGGCGTGGCAGTTCGCCCAAGTATTTCATGGAGTTCACCAAGGCGTTCCCGTCGCCGGCCAACACGCGGGTGATGCTGGTCGACAACTAC > NC_002947/2928448‑2928593 GCCGGCGACGGGAACGCCTTGGTGAACTCCATGAAATACTTGGGCGAACTGCCACGCCAGCCGTAGATCGATTGCCAGTCGTCACCCACGCACAGCAACGACGAATGCTGGGCATGGCCGCCCGGTGTGCATGGCCGGGCCGCGGCGCC < 1:39799/149‑1 GCATGG‑CGCCCGGTGTGCATGGCCGGGCCGCGGCGCCATGCCCAGCATTCGTCGTTGCTGTGCGTGGGTGACGACTGGCAATCGATCTACGGCTGGCGTGGCAGTTCGCCCAAGTATTTCATGGAGTTCACCAAGGCGTTCCCGTCGCC > 8:248105/1‑149 CATGG‑CGCCCGGTGTGCATGGCCGGGCCGCGGCGCCATGCCCAGCATTCGTCGTTGCTGTGCGTGGGTGACGACTGGCAATCGATCTACGGCTGGCGTGGCAGTTCGCCC > 1:86083/1‑110 CATGG‑CGCCCGGTGTGCATGGCCGGGCCGCGGCGCCATGCCCAGCATTCGTCGTTGCTGTGCGTGGGTGACGACTGGCAATCGATCTACGGCTGGCGTGGCAGTTCGCCC < 2:86083/110‑1 ATGG‑CGCCCGGTGTGCATGGCCGGGCCGCGGCGCCATGCCCAGCATTCGTCGTTGCTGTGCGTGGGTGACGACTGGCAATCGATCTACGGCTGGCGTGGCAGTTCGCCCAAGTATTTCATGGAGTTCACCAAGGCGTTCCCGTCGCCGG > 7:234455/1‑149 GCCATGCCCAGCATTCGTCGTTGCTGTGCGTGGGTGACGACTGGCAATCGATCTACGGCTGGCGTGGCAGTTCGCCCAAGTATTTCATGGAGTTCACCAAGGCGTTCCCGTCGCCGGCCAACACGCGGGTGATGCTGGTCGACAACTAC > 1:149336/1‑149 GCCGGCGACGGGAACGCCTTGGTGAACTCCATGAAATACTTGGGCGAACTGCCACGCCAGCCGTAGATCGATTGCCAGTCGTCACCCACGCACAGCAACGACGAATGCTGGGCATGG‑CGCCCGGTGTGCATGGCCGGGCCGCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2928562‑2928415‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccATGCCCAGCATTCGTCGTTGCTGTGCGTGGGTGACGACTGGCAATCGATCTACGGCTGGCGTGGCAGTTCGCCCAAGTATTTCATGGAGTTCACCAAGGCGTTCCCGTCGCCGGCCAACACGCGGGTGATGCTGGTCGACAACTAC > NC_002947/2928448‑2928593 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |