New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2945472 =	36 (0.600)	4 (0.070)	3/248	NT	8.7%	coding (249/531 nt)	PP_2578	hypothetical protein
	?	NC_002947	2945533 =	50 (0.880)					coding (310/531 nt)	PP_2578	hypothetical protein

TCAGCTCGACCTGCCCTTGCTGCTTCAGGCGCCACACGGCCTCCAGCGAGGCGTAGCGCCCTGGTACCGTGTCGAAGCGTTGCACATCCACCCGCAGCGACGCCTTGCCACCGCCCGCCGGGCCGCCCAACAGGTCCTGCAGGGCGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2945623‑2945472 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcggGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGGCAGGTCGAGCTGACCTGCCGTACGTCAGTGCAGACTGCTGCGGACAACAGCATCACCAGCCTGGTGAAT  >  NC_002947/2945533‑2945679                                                                                                                                                                                                                                                                                                             TCAGCTCGACCTGCCCTTGCTGCTTCAGGCGCCACACGGCCTCCAGCGAGGCGTAGCGCCCTGGTACCGTGTCGAAGCGTTGCACATCCACCCGCAGCGACGCCTTGCCACCGCCCGCCGGGCCGCCCAACAGGGCCTGCAGGGCGCTG                                                                                                                                                        <  6:188772/149‑1   AGCTCGACCTGCCCTTGCTGCTTCAGGCGCCACACGGCCTCCAGCGAGGCGTAGCGCCCTGGTACCGTGTCGAAGCGTTGCACATCCACCCGCAGCGACGCCTTGCCACCGCCCGCCGGGCCGCCTAACAGGTCCTGCAGGGCGCTGCG                                                                                                                                                      >  6:299381/1‑149                                                                                           CCCGCAGCGACGCCTTGCCACCGCCCGCCGGGCCGCCCAACAGGTCCTGCAGGGCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGGCAGGTCGAG                                                              >  2:30819/1‑149                                                                                            CCGCAGCGACGCCTTGCCACCGCCCGCCGGGCCGCCCAACAGGTCCTGCAGGGCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGGCAGGTCGAGC                                                             >  6:96818/1‑149                                                                                            CCGCAGCGACGCCTTGCCACCGCCCGCCGGGCCGCCCAACAGGTCCTGCAGGGCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGG                                                                       >  5:286112/1‑139                                                                                            CCGCAGCGACGCCTTGCCACCGCCCGCCGGGCCGCCCAACAGGTCCTGCAGGGCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGG                                                                       <  6:286112/139‑1                                                                                                                                                       GGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGGCAGGTCGAGCTGACCTGCCGTACGTCAGTGCAGACTGCTGCGGACAACAGCATCACCAGCCTGGTGAAT  <  5:96818/149‑1                                                                                                                                                                                                                                                                                                             TCAGCTCGACCTGCCCTTGCTGCTTCAGGCGCCACACGGCCTCCAGCGAGGCGTAGCGCCCTGGTACCGTGTCGAAGCGTTGCACATCCACCCGCAGCGACGCCTTGCCACCGCCCGCCGGGCCGCCCAACAGGTCCTGCAGGGCGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2945623‑2945472 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcggGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGGCAGGTCGAGCTGACCTGCCGTACGTCAGTGCAGACTGCTGCGGACAACAGCATCACCAGCCTGGTGAAT  >  NC_002947/2945533‑2945679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.