New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2945472 =	36 (0.600)	4 (0.070)	3/248	NT	8.7%	coding (249/531 nt)	PP_2578	hypothetical protein
	?	NC_002947	2945533 =	50 (0.880)					coding (310/531 nt)	PP_2578	hypothetical protein

GGTGCGTGACAGCGGCCAACGCATCCAGGTGGTCAGGGTGGCTGTGCCGCCCCAGGTCGACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGGCAGGTCGA  >  NC_002947/2945325‑2945618                                                                                                                                                    |                                                                                                                                                   attcaccaggctggtgatgctgttgtccgcagcagtctgcactgacgtacggcaggtcagctcgacctgcccttgctgcttcaggcgccacacggcctccagcgaggcgtagcgccctggtaccgtgtcgaagcgttgcacatccaccc                                                                                                                                                   <  5:96818‑M1/2‑1 (MQ=255)     cGTGACAGCGGCCAACGCATCCAGGTGGTCAGGGTGGCTGTGCCGCCCCAGGTCGACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCa                                                                                                                                                <  2:73472/148‑1 (MQ=255)         aCAGCGGCCAACGCATCCAGGTGGTCAGGGTGGCTGTGCCGCCCCAGGTCGACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGcc                                                                                                                                           <  3:269590/149‑1 (MQ=255)                  aaCGCATTCAGGTGGTCAGGGTGGCTGTGCCGCCCCAGGTCGACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGAc                                                                                                                                  >  8:332308/1‑149 (MQ=255)                    cGCATCCAGGTGGTCAGGGTGGCGGTGCCGCCCCAGGTCGACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCt                                                                                                                                <  7:159445/149‑1 (MQ=255)                     gCATCCAGGTGGTCAGGGTGGCTGTGCCGCCCCAGGTCGACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTg                                                                                                                               >  3:71512/1‑149 (MQ=255)                        tCCAGGTGGTCAGGGTGGCTGTGCCGCCCCAGGTCGACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTg                                                                                                                            >  2:121098/1‑149 (MQ=255)                                   aGGGTGGCTGTGCCGCCCCAGGTCGACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCcggc                                                                                                                 <  1:230694/149‑1 (MQ=255)                                             tgCCGCCCCAGGTCGACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTgg                                                                                                        >  6:225634/1‑148 (MQ=255)                                                     cAGGTCGACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATCCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTc                                                                                               <  1:288181/149‑1 (MQ=255)                                                           gACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCg                                                                                         >  7:277545/1‑149 (MQ=255)                                                           gACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCg                                                                                         >  5:6911/1‑149 (MQ=255)                                                           gACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCg                                                                                         >  5:180629/1‑149 (MQ=255)                                                            gctcgacctgcccttgctgcttcaggcgccacacggcctccagcgaggcgtagcgccctggtaccgtgtcgaagcgttgcacatccacCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCgg                                                                                        >  6:96818‑M1/89‑149 (MQ=255)                                                             ctcgacctgcccttgctgcttcaggcgccacacggcctccagcgaggcgtagcgccctggtaccgtgtcgaagcgttgcacatccacCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCggg                                                                                       >  2:30819‑M1/88‑149 (MQ=255)                                                              cGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGt                                                                                      <  5:225634/149‑1 (MQ=255)                                                                      cccttgctgcttcaggcgccacacggcctccagcgaggcgtagcgccctggtaccgtgtcgaagcgttgcacatccacCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCgg                                                                                        <  6:286112‑M1/61‑1 (MQ=255)                                                                      cccttgctgcttcaggcgccacacggcctccagcgaggcgtagcgccctggtaccgtgtcgaagcgttgcacatccacCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCgg                                                                                        >  5:286112‑M1/79‑139 (MQ=255)                                                                              tgCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTc                                                                      <  4:71512/149‑1 (MQ=255)                                                                                  gCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCa                                                                             <  4:283702/138‑1 (MQ=255)                                                                                  gCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCa                                                                             >  3:283702/1‑138 (MQ=255)                                                                                        gCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTAGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTAc                                                            >  5:299381/1‑149 (MQ=255)                                                                                              cGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGgc                                                      <  7:332308/149‑1 (MQ=255)                                                                                                gCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCGGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGgcgc                                                    >  2:242752/1‑149 (MQ=255)                                                                                                       cATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCt                                             <  8:1659/149‑1 (MQ=255)                                                                                                           cTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGc                                          <  8:277545/148‑1 (MQ=255)                                                                                                           cTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGc                                          <  6:6911/148‑1 (MQ=255)                                                                                                              gagaCGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCCGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGa                                      <  1:121098/149‑1 (MQ=255)                                                                                                              gagaCGGAGTGGTGGGCCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGCACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCTACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTg                                        >  6:68425/1‑147 (MQ=255)                                                                                                                   ggAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCg                                 >  7:335446/1‑149 (MQ=255)                                                                                                                     aGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCgtg                               <  2:299758/149‑1 (MQ=255)                                                                                                                       tggtggGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGtgtg                             <  8:263170/149‑1 (MQ=255)                                                                                                                       tggtggGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGtgtg                             <  7:25881/149‑1 (MQ=255)                                                                                                                           ggggCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGgcgc                         <  6:180629/149‑1 (MQ=255)                                                                                                                            gggCGCCAACCTGGTGGATGAATTACGCAGCGCCATGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCAGTGTGGCTcc                        >  3:256478/1‑149 (MQ=255)                                                                                                                                gcCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGaa                    <  4:106243/149‑1 (MQ=255)                                                                                                                                 ccAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGGTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAag                   <  1:242752/149‑1 (MQ=255)                                                                                                                                 ccAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAag                   <  3:189767/149‑1 (MQ=255)                                                                                                                                 ccAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAag                   >  1:379985/1‑149 (MQ=255)                                                                                                                                  cAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAag                   >  4:75970/1‑148 (MQ=255)                                                                                                                                   aaCCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAagca                 <  4:295864/149‑1 (MQ=255)                                                                                                                                              tGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGGCAgg      >  4:248984/1‑149 (MQ=255)                                                                                                                                               gAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGGCAGGt     >  5:299447/1‑149 (MQ=255)                                                                                                                                                aaTTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGGCAGGTc    >  1:18447/1‑149 (MQ=255)                                                                                                                                                  ttCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGGCAGGTc    >  5:349548/1‑147 (MQ=255)                                                                                                                                                  ttCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGGCAGGTCGa  <  6:349548/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GGTGCGTGACAGCGGCCAACGCATCCAGGTGGTCAGGGTGGCTGTGCCGCCCCAGGTCGACCGCCCACAGTTGGTGGTGCGGCAAGGGCAGAGCGGCCTGGCCATTCTGGAGACGGAGTGGTGGGGCGCCAACCTGGTGGATGAATTCCGCAGCGCCCTGCAGGACCTGTTGGGCGGCCCGGCGGGCGGTGGCAAGGCGTCGCTGCGGGTGGATGTGCAACGCTTCGACACGGTACCAGGGCGCTACGCCTCGCTGGAGGCCGTGTGGCGCCTGAAGCAGCAAGGGCAGGTCGA  >  NC_002947/2945325‑2945618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.