| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3063923 | 43 (0.710) | 4 (0.070) | 4/252 | NT | 9.2% | coding (208/462 nt) | PP_2675 | cytochrome c‑type protein |
| ? | NC_002947 | = 3063938 | 38 (0.660) | coding (223/462 nt) | PP_2675 | cytochrome c‑type protein | |||||
CTGACCGGTACAGCCTGGGCCCATGGCAACGTGGTGCCCCAGGCAGTGGAGACCAAGGGCCTGACCCCGATCAAGGACACTGGCGTGAGCCTGGACGGCGACGGCTGGGCCGCGGTCAACCCGTACCGCAGCTCGCCCGAGCACGACAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3063770‑3063923‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgAGGCGCCGATTTCCACGGCCTTGTCGTGCTCGGGCGAGCTGCGGTACGGGTTGACCGCGGCCCAGCCGTCGCCGTCCAGGCTCACGCCAGTGTCCTTGATCGGGGTCAGGCCCT‑TGGTCTCCACTGCCTGGGGCACCACGTTGCCAT < NC_002947/3063938‑3063792 CTGACCGGTACAGCCTGGGCCCATGGCAACGTGGTGCCCCAGGCAGTGGAGACCAAGGGCCTGACCCCGATCAAGGACACTGGCGTGAGCCTGGACGGCGACGGCTGGGCCGCGGTCAACCCGTACCGCAGCTCGCCCGAGCACGACAA > 4:36549/1‑149 GACCGGTACAGCCTGGGCCCATGGCAACGTGGTGCCCCAGGCAGTGGAGACCAAGGGCCTGACCCCGATCAAGGACACTGGCGTGAGCCTGGACGGCGACGGCTGGGCCGCGGTCAACCCGTACCGCAGCTCGCCCGAGCACGACAAGG > 1:178381/1‑149 ACCGGTACAGCCTGGGCCCATGGCAACGTGGTGCCCCAGGCAGTGGAGACCAAGGGCCTGACCCCGATCAAGGACACTGGCGTGAGCCTGGACGGCGACGGCTGGGCCGCGGTCAACCCGTACCGCAGCTCGCCCGAGCACGACAAGGC > 1:73030/1‑149 CGGTACAGCCTGGGCCCATGGCAACGTGGTGCCCCAGGCAGTGGAGACCAAGGGCCTGACCCCGATCAAGGACACTGGCGTGAGCCTGGACGGCGACGGCTGGGCCGCGGTCAACCCGTACCGCAGCTCGCCCGAGCACGACAAGGCCG > 8:253028/1‑149 TGCCCCAGGCAGTGGAGACCAAGGGCCTGACCCCGATCAAGGACACTGGCGTGAGCCTGGACGGCGACGGCTGGGCCGCGGTCAACCCGTACCGCAGCTCGCCCGAGCACGACAAGGCCGAGGCGCCGATTTCCACGGCCTTGTCGTGC < 5:114118/149‑1 CCAGGCAGTGGAGACCAAGGGCCTGACCCCGATCAAGGACACTGGCGTGAGCCTGGACGGCGACGGCTGGGCCGCGGTCAACCCGTACCGCAGCTCGCCCGAGCACGACAAGGCCGAGGCGCCGATTTCCACGGCCTTGTCGTGCTCGG < 2:145105/149‑1 GCGACGGCTGGGCCGCGGTCAACCCGTACCGCAGCTCGCCCGAGCACGACAAGGCCGAGGCGCCGATTTCCACGGCCTTGTCGT < 1:144775/84‑1 GCGACGGCTGGGCCGCGGTCAACCCGTACCGCAGCTCGCCCGAGCACGACAAGGCCGAGGCGCCGATTTCCACGGCCTTGTCGT > 2:144775/1‑84 GGCCGAGGCGCCGATTTCCACGGCCTTGTCGTGCTCGGGCGAGCTGCGGTACGGGTTGACCGCGGCCCAGCCGTCGCCGTCCAGGCTCACGCCAGTGTCCTTGATCGGGGTCAGGCCCT‑TGGTCTCCACTGCCTGGGGCACCACGTTGC > 2:337425/1‑149 CGAGGCGCCGATTTCCACGGCCTTGTCGTGCTCGGGCGAGCTGCGGTACGGGTTGACCGCGGCCCAGCCGTCGCCGTCCAGGCTCACGCCAGTGTCCTTGATCGGGGTCAGGCCCTATGGTCTCCACTGCCTGGGGCACCACGTTGCCA < 1:40615/149‑1 CGAGGCGCCGATTTCCACGGCCTTGTCGTGCTCGGGCGAGCTGCGGTACGGGTTGACCGCGGCCCAGCCGTCGCCGTCCAGGCTCACGCCAGTGTCCTTGATCGGGGTCAGGCCCT‑TGGTCTCCACTGCCTGGGGCACCACGTTGCCAT > 2:254251/1‑149 CTGACCGGTACAGCCTGGGCCCATGGCAACGTGGTGCCCCAGGCAGTGGAGACCAAGGGCCTGACCCCGATCAAGGACACTGGCGTGAGCCTGGACGGCGACGGCTGGGCCGCGGTCAACCCGTACCGCAGCTCGCCCGAGCACGACAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3063770‑3063923‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgAGGCGCCGATTTCCACGGCCTTGTCGTGCTCGGGCGAGCTGCGGTACGGGTTGACCGCGGCCCAGCCGTCGCCGTCCAGGCTCACGCCAGTGTCCTTGATCGGGGTCAGGCCCT‑TGGTCTCCACTGCCTGGGGCACCACGTTGCCAT < NC_002947/3063938‑3063792 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |