| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4308293 = | 36 (0.600) | 3 (0.050) | 3/256 | NT | 7.1% | intergenic (‑46/‑302) | PP_3780/PP_3781 | hypothetical protein/oxygen‑independent coproporphyrinogen III oxidase family protein |
| ? | NC_002947 | 4308337 = | 44 (0.750) | intergenic (‑90/‑258) | PP_3780/PP_3781 | hypothetical protein/oxygen‑independent coproporphyrinogen III oxidase family protein | |||||
AATAAGTGGTGCGCGGTAATGGTTTTACGTATTTTTAAAAGGTGGATTGGTTCGGTTTTATATGCGGCGTGGTTGATGTTCCTTGCAGTAAGTGATTTGAAGGGCATAAGTGTCGCGGGCTACGCTGAAGGTGCGAGCCAGGGCGATACTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4308443‑4308293‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acttATGCCCTTCAAATCACTTACTGCAAGGAACATCAACCACGCCGCATATAAAACCGAACCAATCCACCTTTTAAAAATACGTAAAACCATTACCGCGCACCACTTATTAATATCAACTTTTTCACAGGCAATACATTTTTGATATAGA > NC_002947/4308337‑4308483 AATAAGTGGTGCGCGGTAATGGTTTTACGTATTTTTAAAAGGTGGATTGGTTCGGTTTTATATGCGGCGTGGTTGATGTTCCTTGCAGTAAGTGATTTGAAGGGCATAAGTGTCGCGGGCTACGCTGAAGGTGCGAGCCAGGGCGATAC > 5:227283/1‑149 CATAAGTGTCGCGGGCTACGCTGAAGGTGCGAGCCAGGGAGATACTTATGACCTTCAAATCACTTACTGAAATGAACATCAACCACGCCGCATATAAAACCGAACCAATCCACCTGTTAAAAATACGTAACACCATTACCTCGCACCAC > 8:81902/1‑149 ATAAGTGTCGCGGGCTACGCTGAAGGTGCGAGCCAGGGCGATACTTATGCCCTTCAAATCACTTACTGCAAGGAACATCAACCACGCCGCATATAAAACCGAACCAATCCACCTTTTAAAAATACGTAAAACCATTACCGCGCACCACT > 5:11537/1‑149 GTGTCGCGGGCTACGCTGAAGGTGCGAGCCAGGGCGATACTTATGCCCTTCAAATCACTTACTGCAAGGAACATCAACCACGCCGCATATAAAACCGAACCAATCCACCTTTTAAAAATACGTAAAACCATTACCGCGCACCACTTATT < 6:11537/149‑1 TTATGCCCTTCAAATCACATACTTCAAGGAAAATCAACCACGCCGCATATAAAACCGAACCAATCAACCTTTTAAAAATACGTAAAACCATTACCGCGCACCACTTATTAATATCAACTTTTTCACAGGCAATACATTTTTGATATAGA < 7:296777/149‑1 AATAAGTGGTGCGCGGTAATGGTTTTACGTATTTTTAAAAGGTGGATTGGTTCGGTTTTATATGCGGCGTGGTTGATGTTCCTTGCAGTAAGTGATTTGAAGGGCATAAGTGTCGCGGGCTACGCTGAAGGTGCGAGCCAGGGCGATACTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4308443‑4308293‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acttATGCCCTTCAAATCACTTACTGCAAGGAACATCAACCACGCCGCATATAAAACCGAACCAATCCACCTTTTAAAAATACGTAAAACCATTACCGCGCACCACTTATTAATATCAACTTTTTCACAGGCAATACATTTTTGATATAGA > NC_002947/4308337‑4308483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |