| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4644814 | 52 (0.860) | 3 (0.050) | 3/256 | NT | 5.9% | intergenic (‑124/‑66) | PP_4109/PP_5658 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 4644882 | 45 (0.770) | coding (3/483 nt) | PP_5658 | hypothetical protein | |||||
ACGGGGTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4644691‑4644814‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggCATTCAGATCACCTGTTGCAGGCCCGGCTCTTCCCAGGCAGACCCGCCCCTCACAGGTGCCCTGCATACCCCAAGCAACATGCGATCGCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAGTAGAGACAACAGAGACGGCCTGC < NC_002947/4644882‑4644739 ACGGGGTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGG > 5:155294/1‑123ACGGGGTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGG < 6:155294/123‑1 GGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGCATTCAGATCACCTGTTGCAGGCCCGGCTCTTCCCAGGCAGACCCGCCCCTCACAGG > 6:322713/1‑149 GGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGCATTCAGATCACCTGTTGCAGGCCCGGCTCTTCCCAGGCAGACCCGCCCCTCACAGGTGCCCTGCATACCCC < 8:254117/149‑1 AGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGCATTCAGATCACCTGTTGCAGGCCCGGCTCTTCCCAGGCAGACCCGCCCCTCACAGGTGCCCTGCATACCCCAAG < 5:322713/149‑1 GGGGCATTCAGATCACCTGTTGCAGGCCCGGCTCTTCCCAGGCAGACCCGCCCCTCACAGGTGCCCTGCATACCCCAAGCAACATGCGATCGCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAGTAGAGACAACAGAGACGGCCTGC < 3:16937/148‑1 GGGGCATTCAGATCACCTGTTGCAGGCCCGGCTCTTCCCAGGCAGACCCGCCCCTCACAGGTGCCCTGCATACCCCAAGCAACATGCGATCGCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAGTAGAGACAACAGAGACGGCCTGC < 5:363984/148‑1 ACGGGGTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4644691‑4644814‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggCATTCAGATCACCTGTTGCAGGCCCGGCTCTTCCCAGGCAGACCCGCCCCTCACAGGTGCCCTGCATACCCCAAGCAACATGCGATCGCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAGTAGAGACAACAGAGACGGCCTGC < NC_002947/4644882‑4644739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |