New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4644814	52 (0.860)	3 (0.050)	3/256	NT	5.9%	intergenic (‑124/‑66)	PP_4109/PP_5658	hypothetical protein/hypothetical protein
	?	NC_002947	= 4644882	45 (0.770)					coding (3/483 nt)	PP_5658	hypothetical protein

CGGGTACTTGGTGCTCAAACGGGGTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGCCACACCACACGAGGATCCCGAGTGAGCGCCGAAGAACCCCTGATCGC  >  NC_002947/4644673‑4644962                                                                                                                                              |                                                                                                                                                     cGGGTACTTGGTGCTCAAACGGGGTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAg                                                                                                                                               <  8:226560/149‑1 (MQ=255)          gggtcTCAAACGGGGGTACCTCGGTGGGTGTATAGGCTGACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCAcat                                                                                                                                        <  8:210483/143‑3 (MQ=39)           gTGCTCAAACGGGGTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCtgtg                                                                                                                                     <  3:302770/149‑1 (MQ=255)               tCAAACGGGGTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAggg                                                                                                                                 >  2:309633/1‑149 (MQ=255)               tCAAACGGGGTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAggg                                                                                                                                 >  1:66758/1‑149 (MQ=255)                 aaaCGGGGTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCACGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGc                                                                                                                               <  1:309633/149‑1 (MQ=255)                   aCGGGGTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCgg                                                                                                                             <  2:78560/149‑1 (MQ=255)                     ggggTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGt                                                                                                                           <  1:133404/149‑1 (MQ=255)                         ttACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGc                                                                                                                       <  2:371185/149‑1 (MQ=255)                            ccTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTg                                                                                                                    <  5:210885/149‑1 (MQ=255)                             cTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTgg                                                                                                                   >  2:33154/1‑149 (MQ=255)                             cTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTgg                                                                                                                   >  2:366978/1‑149 (MQ=255)                             cTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCAGGTCTGCCTgg                                                                                                                   >  1:319333/1‑149 (MQ=255)                                      tgtATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCg                                                                                                          <  2:66758/149‑1 (MQ=255)                                       gtATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCgg                                                                                                         <  4:64974/149‑1 (MQ=255)                                        tataGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCgg                                                                                                         <  5:28773/148‑1 (MQ=255)                                        tataGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCgg                                                                                                         <  1:174864/148‑1 (MQ=255)                                        tataGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCgg                                                                                                         <  3:259913/148‑1 (MQ=255)                                             gCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGCGCCGGGCCTg                                                                                                    >  7:246736/1‑148 (MQ=255)                                             gCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTg                                                                                                    >  7:276874/1‑148 (MQ=255)                                                   gggCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGcattcagatcacctgttgcaggcccggctcttcccaggcagacccgcccctcacagg                                                                                             >  6:322713‑M1/1‑92 (MQ=255)                                                   gggCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAgg                                                                                             >  6:311201/1‑149 (MQ=255)                                                     gcgcGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTg                                                                                           <  5:311201/149‑1 (MQ=255)                                                      cgcgTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGa                                                                                          <  5:165650/149‑1 (MQ=255)                                                       gcgTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGa                                                                                          >  8:174533/1‑148 (MQ=255)                                                            gagTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGaa                                                                                    >  2:366945/1‑149 (MQ=255)                                                            gagTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGaa                                                                                    <  1:366978/149‑1 (MQ=255)                                                                  ggCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGcattcagatcacctgttgcaggcccggctcttcccaggcagacccgcccctcacaggtgccctgcatacccc                                                                              <  8:254117‑M1/149‑73 (MQ=255)                                                                   gCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGcccc                                                                              <  3:16937‑M2/148‑5 (MQ=255)                                                                   gCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGcccc                                                                              <  5:363984‑M2/148‑5 (MQ=255)                                                                     aGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGcattcagatcacctgttgcaggcccggctcttcccaggcagacccgcccctcacaggtgccctgcataccccaag                                                                           <  5:322713‑M1/149‑76 (MQ=255)                                                                       gCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGaa                                                                                                                <  1:141123/110‑1 (MQ=255)                                                                       gCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGaa                                                                                                                >  2:141123/1‑110 (MQ=255)                                                                                 ttgtCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACATGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGc                                                               >  6:283630/1‑149 (MQ=255)                                                                                   gtCTCTACTGGCCTGTGCGCGGGCAGGCCCGCCCCCACAGCGATCGGATGGTGCTTGGGGGATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGcc                                                              <  8:246736/148‑1 (MQ=255)                                                                                   gtCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGccc                                                             >  7:160866/1‑149 (MQ=255)                                                                                    tctcTACTGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCAGGTCTGCCTGGGAAGAGGCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGccc                                                             <  2:319333/148‑1 (MQ=255)                                                                                      tctACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGAATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTATGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCccgcc                                                          >  2:341265/1‑149 (MQ=255)                                                                                       ctACTGGCCTCTTCGCGGGCACGCCCGATCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCAGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCccgcc                                                          >  4:233403/1‑148 (MQ=255)                                                                                        tACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGa                                                        >  2:14406/1‑149 (MQ=255)                                                                                        tACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCCGTTAGGGTGCCCGCCGa                                                        >  8:183127/1‑149 (MQ=255)                                                                                             gCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGc                                                     <  4:16937/147‑1 (MQ=255)                                                                                              ccTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCAGCCGATGCACg                                                  >  4:214631/1‑149 (MQ=255)                                                                                                 ctTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGcca                                               >  6:356884/1‑149 (MQ=255)                                                                                                    cgcgGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGccac                                              <  6:363984/147‑1 (MQ=255)                                                                                                     gcgGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGccacac                                            <  8:276874/148‑1 (MQ=255)                                                                                                     gcgGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGccacac                                            >  1:81453/1‑148 (MQ=255)                                                                                                             gCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGCCACACCACACGAg                                    >  1:198860/1‑148 (MQ=255)                                                                                                             gCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGGCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGCCACACCACACGAgg                                   <  5:245505/149‑1 (MQ=255)                                                                                                               ccGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGaa                                                                                                                <  2:132455/70‑1 (MQ=255)                                                                                                               ccGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGaa                                                                                                                >  1:132455/1‑70 (MQ=255)                                                                                                                    cccACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTCAGGGTGCCCGCCGATGCACGCCACACCACACGAGGATCCCGa                            <  7:174533/149‑1 (MQ=255)                                                                                                                      cacaGCGATCGCTTGTTGCTTGGGGTATGCAGGGCACCTTTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGCCACACCACACGAGGATCCCGAGt                          <  1:14017/149‑1 (MQ=255)                                                                                                                       acaGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGCCACACCACACGAGGATCCCGAGt                          >  1:238500/1‑148 (MQ=255)                                                                                                                                 cATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGCCACACCACACGAGGATCCCGAGTGAGCGCCg                  >  3:281534/1‑146 (MQ=255)                                                                                                                                       gCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGCCACACCACACGAGGATCCCGAGTGAGCGCCGAAGAAcccc         >  1:133367/1‑149 (MQ=255)                                                                                                                                       gCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGCCACACCACACGAGGATCCCGAGTGAGCGCCGAAGAAccc          <  1:366945/148‑1 (MQ=255)                                                                                                                                        cTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGccccaagcaacatgcgatcgctgtgggagcgggcgtgcccgcgaagaggccagtagagacaacagagacggcct        <  5:322713‑M2/149‑75 (MQ=255)                                                                                                                                           ggggcattcagatcacctgttgcaggcccggctcttcccaggcagacccgcccctcacaggtgccctgcataccccaagcaacatgcgatcgctgtgggagcgggcgtgcccgcgaagaggccagtagagacaacagagacggcctgc      <  3:16937‑M1/148‑145 (MQ=255)                                                                                                                                           ggggcattcagatcacctgttgcaggcccggctcttcccaggcagacccgcccctcacaggtgccctgcataccccaagcaacatgcgatcgctgtgggagcgggcgtgcccgcgaagaggccagtagagacaacagagacggcctgc      <  5:363984‑M1/148‑145 (MQ=255)                                                                                                                                           ggggTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGccccaagcaacatgcgatcgctgtgggagcgggcgtgcccgcgaagaggccagtagagacaacagagacggcctgcc     <  8:254117‑M2/149‑78 (MQ=255)                                                                                                                                           gcggTAGGCAGGGCACCTGTGCGGCGCGGGCCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGCCACACCACACGAGGATCCCGAGTGAGCGCCGAAGAACCCCTg       <  4:281534/145‑1 (MQ=255)                                                                                                                                              gTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGCCACACCACACGAGGATCCCGAGTGAGCGCCGAAGAACCCCTGATCGc  >  5:39279/1‑149 (MQ=255)                                                                                                                                              |                                                                                                                                                     CGGGTACTTGGTGCTCAAACGGGGTTACCTCGGTGGGTGTATAGGCGTACGGGCGCGTAGAGTACGGCAGGCCGTCTCTGTTGTCTCTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGCGATCGCATGTTGCTTGGGGTATGCAGGGCACCTGTGAGGGGCGGGTCTGCCTGGGAAGAGCCGGGCCTGCAACAGGTGATCTGAATGCCCCGATCTGTTAGGGTGCCCGCCGATGCACGCCACACCACACGAGGATCCCGAGTGAGCGCCGAAGAACCCCTGATCGC  >  NC_002947/4644673‑4644962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.