New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4893579 | 23 (0.380) | 5 (0.100) | 3/210 | NT | 18.8% | intergenic (+54/‑154) | pyk/PP_4302 | pyruvate kinase/urea transporter |
? | NC_002947 | = 4893604 | 25 (0.520) | intergenic (+79/‑129) | pyk/PP_4302 | pyruvate kinase/urea transporter |
GAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4893409‑4893579 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgacacaaggccgctcccacagggACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCCCCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAAGGCACGCCAGCG < NC_002947/4893604‑4893462 GAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGC < 8:241166/148‑1 TTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACAC < 3:254329/149‑1 CCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGG < 8:254108/149‑1 CCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGG > 6:277495/1‑149 GCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCA > 4:331171/1‑147 CATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAG > 3:125834/1‑149 TGGCCAGCCGTGGCGACACGCTTCTGATCACCGCTGGCTTGCCTTTCTGCAAGCCTGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTTCGCCCCTTTCGCGACACAAGGCCGCTCCCAAAGG < 8:158489/148‑1 GACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCA > 8:189103/1‑130 CTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGG < 5:277495/149‑1 CTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTAAGATTGCCGGGGGCGCGTTGCGCCCGTTTCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGG < 7:271101/149‑1 GCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGA < 3:331171/148‑1 CTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGA < 4:89817/142‑1 CTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGA > 3:89817/1‑142 AAGGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCCCCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGA > 5:366443/1‑147 GGCCGCTCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCCCCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAAGG > 5:36712/1‑149 CGCGCCCACACGGACTGCATTCCGTTGTGCCAGCGTGGCCCTGGGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCCCCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAAGGCAC < 7:147414/149‑1 TCCCACAGGGACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCCCCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAAGGCACGCC > 7:339720/1‑149 ACAGGGACTGCTTTCCCTTGTCCCCGCGTGGCCCTGGGGGTGCGGCCTTGTGGCGCGAAAGGGGCGCAACGCGCCCCCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAAGGCACGCCAGCG < 1:346541/149‑1 GAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4893409‑4893579 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgacacaaggccgctcccacagggACTGCATTCCCTTGTGCCAGCGTGGCCCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCAACGCGCCCCCGGCAATCTCAGATCAAAGTCTCGATCCGCAGCGTGTTAGTCGTACCCGGCTTGCCGAAAGGCACGCCAGCG < NC_002947/4893604‑4893462 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |