| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5581109 | 37 (0.610) | 4 (0.070) | 4/252 | NT | 8.9% | coding (144/1458 nt) | PP_4910 | hypothetical protein |
| ? | NC_002947 | = 5581144 | 47 (0.820) | coding (179/1458 nt) | PP_4910 | hypothetical protein | |||||
CCGAGCTCTGTGAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5580957‑5581109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcTCATGCATGGCCTGCTTGAACTGCAGGCCCATCACGCAGGCGTAGATCACCAGCGCCAGCGCCACCAG < NC_002947/5581144‑5581077 CCGAGCTCTGTGAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGC > 5:174080/1‑149CCGAGCTCTGTGAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGC > 7:22328/1‑149CCGAGCTCTGTGAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGC > 8:109233/1‑149 TCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCTCATGCATGGCCTGCTTGAACTG > 6:142186/1‑148 CCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCTCATGCATGGCCTGCTTGAACTGCAGGCCCATCACGCAGGCG < 6:174080/148‑1 CTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCTCATGCATGGCCTGCTTGAACTGCAGGCCCATCACGCAGGCGT < 1:19565/148‑1 ATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCTCATGCATGGCCTGCTTGAACTGCAGGCCCATCACGCAGGCGTAGA < 5:142186/148‑1 CCTGCTCATGCATGGCCTGCTTGAACTGCAGGCCCATCACGCAGGCGTAGATCACCAGCGCCAGCGCCACCAG < 3:251674/73‑1 CCTGCTCATGCATGGCCTGCTTGAACTGCAGGCCCATCACGCAGGCGTAGATCACCAGCGCCAGCGCCACCAG > 4:251674/1‑73 CCGAGCTCTGTGAACCGGCCCACGCCAGTCAAACCAGACAATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5580957‑5581109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcTCATGCATGGCCTGCTTGAACTGCAGGCCCATCACGCAGGCGTAGATCACCAGCGCCAGCGCCACCAG < NC_002947/5581144‑5581077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |