New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5581109	37 (0.610)	4 (0.070)	4/252	NT	8.9%	coding (144/1458 nt)	PP_4910	hypothetical protein
	?	NC_002947	= 5581144	47 (0.820)					coding (179/1458 nt)	PP_4910	hypothetical protein

AATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCAATCTA  >  NC_002947/5580996‑5581288                                                                                                                                                     |                                                                                                                                                 aaTTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGa                                                                                                                                                  <  2:251392/149‑1 (MQ=255)        tcCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGcc                                                                                                                                           >  2:58276/1‑149 (MQ=255)           tgatgaTCTATCGCGCCCTGAGTCAACGTCGTGTTCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCGGGCGCTGGTGATATACGCCTGCGTGATGGGCCTGCAGTTAAATCACGCCATTCATGAGCAGGCCGAt                                                                                                                                        >  2:139473/1‑149 (MQ=255)             atgatCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGAt                                                                                                                                        <  3:70001/147‑1 (MQ=255)                     tCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTggg                                                                                                                                <  7:230579/147‑1 (MQ=255)                     tCGCGACCTGAGTCAACGTCGTGTGCCTCTGGCACTGCGCAACGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATGTACGCCTGCGTGATGGTCCTGTAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTgg                                                                                                                                 <  4:199491/146‑1 (MQ=255)                       gcgcCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGc                                                                                                                               >  2:192086/1‑146 (MQ=255)                           ccTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGcc                                                                                                                        >  5:214795/1‑149 (MQ=255)                               aGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGa                                                                                                                     <  4:42685/148‑1 (MQ=255)                                     cgtcgtGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCa                                                                                                              <  8:22328/149‑1 (MQ=255)                                     cgtcgtGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCa                                                                                                              <  1:192086/149‑1 (MQ=255)                                              ccGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCaa                                                                                                      >  5:165620/1‑148 (MQ=255)                                                    gCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCgg                                                                                                <  1:364574/148‑1 (MQ=255)                                                     cACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCg                                                                                                 <  3:131012/146‑1 (MQ=255)                                                     cACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCg                                                                                                 >  4:131012/1‑146 (MQ=255)                                                      aCTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCa                                                                                             >  8:233861/1‑149 (MQ=255)                                                                  cTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTgg                                                                                 >  5:60805/1‑149 (MQ=255)                                                                  cTGCAACAACATTTTACTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCATTTAAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTTACCACCCAGACTGCAACATCGGCCACCGAGCTGCTgg                                                                                 >  8:67447/1‑149 (MQ=255)                                                                     cACCAACTTTTTCGTGGTGGCGCTGGCGCTTGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATTCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGTCCACCCAGACTGCAACATCGGCCACCGAGCTGCTGgtg                                                                               <  3:101540/148‑1 (MQ=255)                                                                     cACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGgtgt                                                                              >  4:297396/1‑149 (MQ=255)                                                                        cAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTcc                                                                            >  7:65216/1‑148 (MQ=255)                                                                        cAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTcc                                                                            >  6:86057/1‑148 (MQ=255)                                                                         aaCATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCaa                                                                          >  1:366112/1‑149 (MQ=255)                                                                                tCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATc                                                                   >  5:30383/1‑149 (MQ=255)                                                                                tCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATc                                                                   >  4:368862/1‑149 (MQ=255)                                                                                  cTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcagg                                                                                                                                             <  3:251674‑M2/73‑6 (MQ=255)                                                                                  cTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcagg                                                                                                                                             >  4:251674‑M2/1‑68 (MQ=255)                                                                                  cTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATcc                                                                  <  1:139473/148‑1 (MQ=255)                                                                                  cTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCt                                                                 <  5:86057/149‑1 (MQ=255)                                                                                     gtggCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTc                                                                <  6:165620/147‑1 (MQ=255)                                                                                     gtggCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCa                                                               <  3:289692/148‑1 (MQ=255)                                                                                               atctggTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTg                                                    <  3:16124/147‑1 (MQ=255)                                                                                                  tggTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTa                                                 >  2:130499/1‑149 (MQ=255)                                                                                                    gTGAGCTACGCCTGCGGGATGGGCCTGCAGTTCAAGCAGGCCATGCTTGAGCAGGCCGATGCCTTGGGCCATAGCCTGACCACCCAGACTTAAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAAAGTGCTAc                                                <  6:30383/148‑1 (MQ=255)                                                                                                        tCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagtgccagcggcacacgacgttgactcagggcgcgatagatcat                                            <  5:142186‑M2/148‑103 (MQ=255)                                                                                                           aCGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagtgccagcggcacacgacgttgactcagggcgcgatagatcatcag                                         <  1:19565‑M2/148‑106 (MQ=255)                                                                                                            cGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagtgccagcggcacacgacgttgactcagggcgcgatagatcatcagg                                        <  6:174080‑M2/148‑107 (MQ=255)                                                                                                             gCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCt                                      >  6:165237/1‑149 (MQ=255)                                                                                                                tGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGctgctg                                                                                  <  5:180202/102‑1 (MQ=255)                                                                                                                tGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGctgctg                                                                                  >  6:180202/1‑102 (MQ=255)                                                                                                                               cAGTTCAAGCAGGCCATGCATGAgcaggcgtagatcaccagcgccagcgccaccaggaaaatgttggtgcaggcgatgcgcagtgccagcggcacacgacgttgactcagggcgcgatagatcatcaggaagaaattgtctggtttga                     >  6:142186‑M2/1‑23 (MQ=255)                                                                                                                               cAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCtgg                     <  7:233861/148‑1 (MQ=255)                                                                                                                                aGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCtggtg                   >  2:229799/1‑149 (MQ=255)                                                                                                                                 gTTCAAGCAGGCCATGCTTGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTTCTACTGGGCAACCTGGTTAAAAACCCGCtggtgg                  <  6:308820/149‑1 (MQ=255)                                                                                                                                  ttCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTg                                              <  4:298927/120‑1 (MQ=255)                                                                                                                                  ttCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTg                                              >  3:298927/1‑120 (MQ=255)                                                                                                                                  ttCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGc                 <  7:337299/149‑1 (MQ=255)                                                                                                                                  ttCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGc                 >  8:337299/1‑149 (MQ=255)                                                                                                                                  ttCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGc                 <  1:58276/149‑1 (MQ=255)                                                                                                                                  ttCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGc                 <  3:297396/149‑1 (MQ=255)                                                                                                                                    caggCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGcc                >  4:242643/4‑148 (MQ=255)                                                                                                                                      aGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCAt             >  5:127272/1‑149 (MQ=255)                                                                                                                                       gCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGCCTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATg            >  6:303245/1‑149 (MQ=255)                                                                                                                                             catgcatgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGtt                                  >  6:295839/1‑121 (MQ=255)                                                                                                                                             catgcatgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGtt                                  <  5:295839/121‑1 (MQ=255)                                                                                                                                              atgcatgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCAAt     >  2:214862/1‑149 (MQ=255)                                                                                                                                                gcatgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCAATc    >  2:218585/1‑148 (MQ=255)                                                                                                                                                  atgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGc                        <  6:292558/126‑1 (MQ=255)                                                                                                                                                  atgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGc                        >  5:292558/1‑126 (MQ=255)                                                                                                                                                  atgAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCAATCTa  >  8:200272/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                 AATTTCTTCCTGATGATCTATCGCGCCCTGAGTCAACGTCGTGTGCCGCTGGCACTGCGCATCGCCTGCACCAACATTTTCCTGGTGGCGCTGGCGCTGGTGATCTACGCCTGCGTGATGGGCCTGCAGTTCAAGCAGGCCATGCATGAGCAGGCCGATGCCTTGGGCCAGAGCCTGACCACCCAGACTGCAACATCGGCCACCGAGCTGCTGGTGTCCAACGACATCCTCAGTCTCAACGTGCTACTGGGCAACCTGGTTAAAAACCCGCTGGTGGCCCATGCGGCAATCTA  >  NC_002947/5580996‑5581288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.