| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5656486 = | 65 (1.080) | 6 (0.100) | 5/254 | NT | 8.0% | coding (1209/1998 nt) | tktA | transketolase A |
| ? | NC_002947 | 5656524 = | 75 (1.290) | coding (1171/1998 nt) | tktA | transketolase A | |||||
ACCATCGCCAGCCGCAAGGCCAGCCAGAACGCCCTGAACGCCTTCGGCCCGCTGCTGCCCGAGTTCCTCGGCGGTTCGGCGGACCTGGCCGGCTCCAACCTGACCCTGTGGAAAGGTTGCAAGGGCGTCGAAGCCAATGACGCCAGCGGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5656638‑5656486‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaacCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGTTGATG > NC_002947/5656524‑5656666 ACCATCGCCAGCCGCAAGGCCAGCCAGAACGCCCTGAACGCCTTCGGCCCGCTGCTGCCCGAGTTCCTCGGCGGTTCGGCGGACCTGGCCGGCTCCAACCTGACCCTGTGGAAAGGTTGCAAGGGCGTCGAAGCCAATGACGCCAGCGG < 5:304061/149‑1 TCGCCAGCCGCAAGGCCAGCCAGAACGCCCTGAACGCCTTCGGCCCGCTGCTGCCCGAGTTCCTCGGCGGTTCGGCGGACCTGGCCGGCTCCAACCTGACCCTGTGGAAAGGTTGCAAGGGCGTCGAAGCCAATGACGCCAGCGGCAAC < 5:323502/149‑1 TGTAGAAAGGTTGCAAGGGCGTCGAAGCCAATGACGCCAGCGGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGC > 1:159151/1‑149 GAAAGGTTGCAAGGGCGTCGAAGCCAATGACGCCAGCGGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAG < 3:282313/125‑1 GAAAGGTTGCAAGGGCGTCGAAGCCAATGACGCCAGCGGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAG > 4:282313/1‑125 AAGGGCGTCGAAGCCAATGACGCC‑CTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGG > 5:149060/1‑115 AAGGGCGTCGAAGCCAATGACGCC‑CTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGG < 6:149060/115‑1 AAGGGCGTCGAAGCCAATGACGCC‑CTTGCAACCTTTCCACAGGGTCAAGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTT > 6:32072/1‑149 GCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGTTGATG < 3:195504/148‑1 AACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTG < 5:208667/110‑1 AACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTG > 6:208667/1‑110 ACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTT > 5:177834/1‑126 ACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTT < 6:177834/126‑1 ACCATCGCCAGCCGCAAGGCCAGCCAGAACGCCCTGAACGCCTTCGGCCCGCTGCTGCCCGAGTTCCTCGGCGGTTCGGCGGACCTGGCCGGCTCCAACCTGACCCTGTGGAAAGGTTGCAAGGGCGTCGAAGCCAATGACGCCAGCGGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5656638‑5656486‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaacCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGTTGATG > NC_002947/5656524‑5656666 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |