New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5656486 =65 (1.080)6 (0.100) 5/254 NT 8.0% coding (1209/1998 nt) tktA transketolase A
?NC_002947 5656524 = 75 (1.290)coding (1171/1998 nt) tktA transketolase A

TCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGTTGATG  >  NC_002947/5656379‑5656666
                                                                                                                                                 |                                                                                                                                              
tCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCttt                                                                                                                                             >  4:302190/1‑149 (MQ=255)
 ccATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTc                                                                                                                                            >  4:96466/1‑149 (MQ=255)
  cATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTc                                                                                                                                            >  3:274023/1‑148 (MQ=255)
  cATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGACACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCAGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTc                                                                                                                                            >  3:137547/1‑148 (MQ=255)
   aTGAACATAAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTCGCGTCATTGCCTTCGACGCCCTTGCAACCTTTCca                                                                                                                                          >  2:237495/1‑149 (MQ=255)
     gcaaggccagccagaacgccctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCtaca                                                                                                                                        >  1:159151‑M1/103‑149 (MQ=255)
        cATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAggg                                                                                                                                     <  8:52506/149‑1 (MQ=255)
        cATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAggg                                                                                                                                     <  8:46655/149‑1 (MQ=255)
               aaGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGtt                                                                                                                              >  8:82316/1‑149 (MQ=255)
                aGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTg                                                                                                                             <  3:282122/149‑1 (MQ=255)
                  gTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGa                                                                                                                           <  3:302190/149‑1 (MQ=255)
                      cgcCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCg                                                                                                                       >  1:322728/1‑149 (MQ=255)
                       gcCGTAAGGCACCAGGCCACCGTGCAGGGCTACGCCGTTGATGATGGCGGTGATGCCTATCTCGCGCACGCCGTTGAACACGTAGTTGCCGCTGGCGTCTTTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCgg                                                                                                                      <  5:349417/149‑1 (MQ=255)
                        ccGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGc                                                                                                                     <  2:252318/149‑1 (MQ=255)
                        ccGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGc                                                                                                                     <  2:6043/149‑1 (MQ=255)
                         ctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTc                                                                                                                                            >  4:282313‑M1/83‑125 (MQ=255)
                         ctgaacgccttcggcccgctgctgcccgagttcctcggcggttcggcggacctggccggctccaacctgaccctgtggaaagGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTc                                                                                                                                            <  3:282313‑M1/43‑1 (MQ=255)
                         cGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGcc                                                                                                                    <  4:130573/149‑1 (MQ=255)
                           tAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAg                                                                                                                  >  1:121193/1‑149 (MQ=255)
                             aGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAgg                                                                                                                 <  7:257909/148‑1 (MQ=255)
                             aGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGt                                                                                                                >  8:336029/1‑149 (MQ=255)
                             aGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGAAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGCCGCCCTAGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGt                                                                                                                >  1:174958/1‑149 (MQ=255)
                                 aCCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCg                                                                                                                       >  8:257376/1‑138 (MQ=255)
                                 aCCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCg                                                                                                                       <  7:257376/138‑1 (MQ=255)
                                 aCCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTccgc                                                                                                            >  4:318305/1‑149 (MQ=255)
                                  ccAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTccgcc                                                                                                           <  5:147925/149‑1 (MQ=255)
                                    aGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTccgccg                                                                                                          >  2:126202/1‑148 (MQ=255)
                                            gTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGa                                                                                                 <  3:96466/149‑1 (MQ=255)
                                             tGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTccgcc                                                                                                           >  1:86151/1‑138 (MQ=255)
                                             tGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTccgcc                                                                                                           <  2:86151/138‑1 (MQ=255)
                                              gCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGACGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAg                                                                                                >  1:272632/1‑148 (MQ=255)
                                                  ggCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACt                                                                                           >  8:187710/1‑149 (MQ=255)
                                                    cAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCg                                                                                         >  3:125270/1‑149 (MQ=255)
                                                    cAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGGTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCg                                                                                         <  6:295753/149‑1 (MQ=255)
                                                     aaCGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCgg                                                                                        <  6:377197/149‑1 (MQ=255)
                                                     aaCGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCgg                                                                                        >  2:186201/1‑149 (MQ=255)
                                                       cGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTTCGCCGAACCGCCGAGGAACTCGGgc                                                                                      <  7:82316/149‑1 (MQ=255)
                                                        gCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCggg                                                                                       >  3:340211/1‑147 (MQ=255)
                                                          cGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGgcag                                                                                    >  1:19017/1‑148 (MQ=255)
                                                              cATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGgc                                                                                      <  2:673/142‑1 (MQ=255)
                                                              cATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGgc                                                                                      >  1:673/1‑142 (MQ=255)
                                                               atgatgGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCg                                                                               <  1:186201/148‑1 (MQ=255)
                                                                       ggTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCTGAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAAGCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAgg                                                                      <  1:237495/149‑1 (MQ=255)
                                                                       ggTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAgg                                                                      >  6:160972/1‑149 (MQ=255)
                                                                         tCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCg                                                                    <  2:135912/149‑1 (MQ=255)
                                                                               cGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAgg                                                              <  4:340211/149‑1 (MQ=255)
                                                                                 aaCTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGGCGGCCAGGTCCGCAGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCTAAGGCGTTCAGGGc                                                            <  6:294610/149‑1 (MQ=255)
                                                                                 aaCTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAgg                                                              <  1:42829/147‑1 (MQ=255)
                                                                                 aaCTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAgg                                                              >  2:42829/1‑147 (MQ=255)
                                                                                    tCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAAccgc                                                                                                    >  8:124732/1‑106 (MQ=255)
                                                                                    tCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAAccgc                                                                                                    <  7:124732/106‑1 (MQ=255)
                                                                                    tCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGtt                                                         >  7:312411/1‑149 (MQ=255)
                                                                                      gcgcACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTGGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTct                                                       <  7:336029/149‑1 (MQ=255)
                                                                                        gcACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGa                                                                                                 >  4:367205/1‑105 (MQ=255)
                                                                                        gcACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGa                                                                                                 <  3:367205/105‑1 (MQ=255)
                                                                                          aCGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTctggct                                                   >  4:20035/1‑149 (MQ=255)
                                                                                           agtcGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTctggct                                                   <  1:323656/145‑1 (MQ=255)
                                                                                               gTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCt                                              >  2:39178/1‑149 (MQ=255)
                                                                                               gTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCt                                              >  6:220514/1‑149 (MQ=255)
                                                                                                  tgtagaaaggttgcaagggcgtcgaagccaatgacgccagcggcaacCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGc                                           >  1:159151‑M2/48‑149 (MQ=255)
                                                                                                    acacGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCg                                          <  8:312411/148‑1 (MQ=255)
                                                                                                     cacGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGc                                        >  2:163420/1‑149 (MQ=255)
                                                                                                      gaaaggttgcaagggcgtcgaagccaatgacgccagcggcaacCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAg                                                               >  4:282313‑M2/44‑125 (MQ=255)
                                                                                                      gaaaggttgcaagggcgtcgaagccaatgacgccagcggcaacCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAg                                                               <  3:282313‑M2/82‑1 (MQ=255)
                                                                                                       cGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTg                                      <  5:160972/149‑1 (MQ=255)
                                                                                                           GTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGa                                  <  5:323502‑M1/149‑1 (MQ=255)
                                                                                                               CCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGt                              <  5:304061‑M1/149‑1 (MQ=255)
                                                                                                                 aagggcgtcgaagccaatgacgcccttgcaacCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAgg                                                              >  5:149060‑M2/33‑115 (MQ=255)
                                                                                                                 aagggcgtcgaagccaatgacgcccttgcaacCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAgg                                                              <  6:149060‑M2/83‑1 (MQ=255)
                                                                                                                 aagggcgtcgaagccaatgacgcccttgcaacCTTTCCACAGGGTCAAGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGttt                            >  6:32072‑M2/33‑149 (MQ=255)
                                                                                                                    ggCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGc                         <  6:13051/149‑1 (MQ=255)
                                                                                                                       gTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCtt                      >  7:264818/1‑149 (MQ=255)
                                                                                                                          agtgtcTTCGACTCCATTTCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCATGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTAGCCTTTg                    <  8:121499/143‑1 (MQ=255)
                                                                                                                          aTTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTgg                   <  3:318305/149‑1 (MQ=255)
                                                                                                                          aTTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTgg                   <  1:163420/149‑1 (MQ=255)
                                                                                                                          aTTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTgg                   <  6:323502/149‑1 (MQ=255)
                                                                                                                            tGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTgg                   >  6:361826/1‑147 (MQ=255)
                                                                                                                             ggCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCTGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCa                 <  6:304061/148‑1 (MQ=255)
                                                                                                                              gCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGACTGGCGATGGTTTCGCCTTTGGCAg                <  1:39178/148‑1 (MQ=255)
                                                                                                                                ttCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCa             >  2:191794/1‑149 (MQ=255)
                                                                                                                                ttCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCa             >  7:185447/1‑149 (MQ=255)
                                                                                                                                ttCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCa             >  2:130921/1‑149 (MQ=255)
                                                                                                                                  cGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCAc            <  2:121193/148‑1 (MQ=255)
                                                                                                                                   gACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGTACCGCCGAGGATCTCGGGCAGCAGCGGGCCGATGGCGTTCAGGGCTTTCTGGCTGGCCTTGCGGCGGGCGATGGTTTCGCCTTTGGCAGCCACt           <  2:322728/148‑1 (MQ=255)
                                                                                                                                   gACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACt           <  5:220514/148‑1 (MQ=255)
                                                                                                                                    aCGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTc         >  2:347969/1‑149 (MQ=255)
                                                                                                                                      gCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGt       >  5:205393/1‑149 (MQ=255)
                                                                                                                                      gCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGt       <  4:125270/149‑1 (MQ=255)
                                                                                                                                      gCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGt       >  3:47917/1‑149 (MQ=255)
                                                                                                                                      gCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGt       <  2:272632/149‑1 (MQ=255)
                                                                                                                                        ccTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGtt      >  7:38069/1‑148 (MQ=255)
                                                                                                                                         cTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGTTGa    <  3:20035/149‑1 (MQ=255)
                                                                                                                                          ttGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGTTGAt   >  4:195504/1‑149 (MQ=255)
                                                                                                                                            gcaacCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGTTGATg  <  3:195504‑M2/143‑1 (MQ=255)
                                                                                                                                              aacCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTg                                      >  6:208667‑M2/4‑110 (MQ=255)
                                                                                                                                              aacCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTg                                      <  5:208667‑M2/107‑1 (MQ=255)
                                                                                                                                               acCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCttt                     <  6:177834‑M2/124‑1 (MQ=255)
                                                                                                                                               acCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCttt                     >  5:177834‑M2/3‑126 (MQ=255)
                                                                                                                                                 |                                                                                                                                              
TCCATGAACATCAGGAAGGTCGCGCCGTAAGGCACCAGGCCACCGTGCAGGGCAACGCCGTTCATGATGGCGGTCATGCCGAACTCGCGCACGCCGTAGAACACGTAGTTGCCGCTGGCGTCATTGGCTTCGACGCCCTTGCAACCTTTCCACAGGGTCAGGTTGGAGCCGGCCAGGTCCGCCGAACCGCCGAGGAACTCGGGCAGCAGCGGGCCGAAGGCGTTCAGGGCGTTCTGGCTGGCCTTGCGGCTGGCGATGGTTTCGCCTTTGGCAGCCACTTCGTTGATG  >  NC_002947/5656379‑5656666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.